Strain Fitness in Pseudomonas simiae WCS417 around PS417_12645

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,751,137	+		PS417_12640	0.23	-2.3
2,751,138	-		PS417_12640	0.24	+0.4
2,751,238	+		PS417_12640	0.33	-0.6
2,751,499	-		PS417_12640	0.56	-1.5
2,751,577	-		PS417_12640	0.63	-1.2
2,751,580	-		PS417_12640	0.64	+1.4
2,751,580	-		PS417_12640	0.64	-0.8
2,751,580	-		PS417_12640	0.64	+0.0
2,751,621	+		PS417_12640	0.67	-2.1
2,752,070	+				-0.6
2,752,137	-				+0.6
2,752,180	+				+1.0
2,752,219	-				+0.7
2,752,327	-		PS417_12645	0.16	+0.1
2,752,429	-		PS417_12645	0.22	-0.4
2,752,601	-		PS417_12645	0.33	-2.0
2,752,633	+		PS417_12645	0.35	-0.2
2,752,633	+		PS417_12645	0.35	+2.1
2,752,633	+		PS417_12645	0.35	-0.7
2,752,634	-		PS417_12645	0.35	+1.8
2,753,034	+				-1.4
2,753,035	-		PS417_12645	0.61	-2.5
2,753,035	-		PS417_12645	0.61	+0.6
2,753,194	+		PS417_12645	0.71	+0.4
2,753,195	-		PS417_12645	0.71	+0.6
2,753,283	+		PS417_12645	0.76	-0.9
2,753,284	-		PS417_12645	0.76	-1.2
2,753,284	-		PS417_12645	0.76	+0.2
2,753,339	+		PS417_12645	0.80	+0.1
2,753,340	-		PS417_12645	0.80	+0.4
2,753,340	-		PS417_12645	0.80	-2.1
2,753,340	-		PS417_12645	0.80	+1.4
2,753,364	+		PS417_12645	0.81	-1.4
2,753,364	+		PS417_12645	0.81	-1.0
2,753,365	-		PS417_12645	0.81	-1.4
2,753,365	-		PS417_12645	0.81	-0.2
2,753,487	+		PS417_12645	0.89	-0.2
2,753,578	-				-0.3
2,753,578	-				+1.0
2,753,596	-				-3.4
2,753,704	+				-2.5
2,753,788	-		PS417_12650	0.13	+0.5
2,754,188	-		PS417_12650	0.55	-1.4
2,754,188	-		PS417_12650	0.55	+2.7
2,754,190	+		PS417_12650	0.56	-2.9
2,754,191	-		PS417_12650	0.56	-1.6
2,754,316	+				-0.2
2,754,634	-				+0.4