Strain Fitness in Pseudomonas simiae WCS417 around PS417_12515

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,723,081	-		PS417_12510	0.85	+0.4
2,723,131	+		PS417_12510	0.86	+0.8
2,723,383	-				+1.0
2,723,517	+				+1.2
2,723,518	-				+0.0
2,723,518	-				+0.1
2,723,584	+				+1.6
2,723,584	+				-0.0
2,723,584	+				+1.0
2,723,585	-				-0.4
2,723,585	-				-0.6
2,723,824	-				-2.9
2,723,835	-				-0.9
2,723,835	-				+0.1
2,723,835	-				-0.7
2,723,922	+				-0.9
2,723,922	+				-1.7
2,723,926	+				+1.0
2,723,927	-				+0.3
2,723,927	-				-0.2
2,723,927	-				-1.1
2,723,927	-				+0.5
2,723,927	-				-0.8
2,723,927	-				+0.4
2,723,983	+				-0.9
2,723,984	-				-0.8
2,724,007	-				-0.2
2,724,007	-				+0.8
2,724,093	+				+2.6
2,724,163	+		PS417_12515	0.11	-0.8
2,724,235	-		PS417_12515	0.18	-2.4
2,724,235	-		PS417_12515	0.18	-2.4
2,725,030	+				-0.9
2,725,122	-				+1.4
2,725,202	-		PS417_12520	0.27	-1.2
2,725,202	-		PS417_12520	0.27	-1.0
2,725,202	-		PS417_12520	0.27	-0.5
2,725,557	+				+1.0
2,725,557	+				-1.4
2,725,558	-				-1.6
2,725,558	-				-1.9
2,725,558	-				-0.2
2,725,558	-				-0.9
2,725,558	-				+1.4
2,725,564	+				-0.2
2,725,564	+				-0.1
2,725,565	-				+1.5
2,725,565	-				-0.1
2,725,565	-				-1.6
2,725,565	-				+0.3
2,725,565	-				-0.7
2,725,577	-				-0.4
2,725,592	-				-0.4
2,725,592	-				+1.6
2,725,669	+		PS417_12525	0.27	+1.8
2,725,669	+		PS417_12525	0.27	+0.5
2,725,669	+		PS417_12525	0.27	-0.6
2,725,744	-		PS417_12525	0.56	-0.2
2,725,852	+				-0.4
2,725,852	+				+0.2
2,725,853	-				-1.1
2,726,081	+		PS417_12530	0.26	+0.7