Strain Fitness in Pseudomonas simiae WCS417 around PS417_11590

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,489,323	+				+0.5
2,489,725	+				+0.1
2,489,725	+				+0.9
2,489,726	-				-0.5
2,489,826	+		PS417_11585	0.24	-0.0
2,490,001	+		PS417_11585	0.51	+2.2
2,490,001	+		PS417_11585	0.51	+0.3
2,490,225	-		PS417_11585	0.84	+2.5
2,490,898	+		PS417_11590	0.18	-1.7
2,490,899	-				+1.5
2,491,225	-		PS417_11590	0.27	+1.1
2,491,225	-		PS417_11590	0.27	+0.0
2,491,227	-		PS417_11590	0.27	+1.4
2,491,908	-		PS417_11590	0.47	-0.2
2,492,237	+		PS417_11590	0.57	-0.2
2,492,240	+		PS417_11590	0.57	+1.8
2,492,241	-		PS417_11590	0.57	+0.4
2,492,771	+		PS417_11590	0.73	-1.4
2,493,248	+		PS417_11590	0.87	-0.1
2,493,402	-				+0.5
2,493,404	+				-1.4
2,493,479	+				-0.0
2,493,638	+				+0.0
2,493,638	+				-0.4
2,493,639	-				-0.1
2,493,805	+				-0.5
2,493,894	+				-0.2
2,493,895	-				-2.2
2,493,931	-				-0.7
2,494,356	+		PS417_11595	0.32	-2.4
2,494,392	-		PS417_11595	0.35	+0.2
2,494,406	+		PS417_11595	0.36	-1.4
2,494,407	-		PS417_11595	0.36	+0.1
2,494,439	+				+0.5
2,494,517	+		PS417_11595	0.45	-0.7
2,494,518	-		PS417_11595	0.45	-0.2
2,494,535	+		PS417_11595	0.46	-0.0
2,494,535	+		PS417_11595	0.46	+0.6