Strain Fitness in Pseudomonas simiae WCS417 around PS417_11345

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,442,432	+				-0.7
2,442,473	+				-0.2
2,442,474	-				-0.6
2,442,652	+				+1.4
2,442,653	-				+1.1
2,442,818	+		PS417_11340	0.28	-0.4
2,443,004	+		PS417_11340	0.59	-2.3
2,443,934	-		PS417_11345	0.40	-0.5
2,444,450	-				+0.4
2,444,656	+		PS417_11345	0.85	+0.1
2,444,656	+		PS417_11345	0.85	-1.3
2,444,657	-		PS417_11345	0.85	-0.8
2,444,657	-		PS417_11345	0.85	-0.4
2,445,271	+		PS417_11350	0.20	-0.9
2,445,272	-		PS417_11350	0.20	+1.1
2,445,272	-		PS417_11350	0.20	-0.6
2,445,272	-		PS417_11350	0.20	-0.2
2,445,331	+		PS417_11350	0.23	-0.5