Strain Fitness in Pseudomonas simiae WCS417 around PS417_11340

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,441,667	+				+0.8
2,441,984	+		PS417_11335	0.49	-2.8
2,442,007	+		PS417_11335	0.53	-0.6
2,442,008	-		PS417_11335	0.53	+0.4
2,442,039	+		PS417_11335	0.60	+0.5
2,442,039	+		PS417_11335	0.60	-1.6
2,442,039	+		PS417_11335	0.60	-0.5
2,442,100	-		PS417_11335	0.72	+0.3
2,442,108	+		PS417_11335	0.73	+0.1
2,442,109	-				-0.2
2,442,110	+		PS417_11335	0.74	-1.2
2,442,110	+		PS417_11335	0.74	-0.1
2,442,110	+		PS417_11335	0.74	-1.7
2,442,111	-		PS417_11335	0.74	+0.4
2,442,111	-				-0.9
2,442,111	-		PS417_11335	0.74	+2.1
2,442,133	-		PS417_11335	0.79	+2.0
2,442,157	-		PS417_11335	0.83	+0.8
2,442,196	-				+1.2
2,442,241	+				+0.1
2,442,242	-				-0.9
2,442,242	-				-0.1
2,442,242	-				+0.9
2,442,432	+				-0.7
2,442,473	+				-0.2
2,442,474	-				-0.6
2,442,652	+				+1.4
2,442,653	-				+1.1
2,442,818	+		PS417_11340	0.28	-0.4
2,443,004	+		PS417_11340	0.59	-2.3
2,443,934	-		PS417_11345	0.40	-0.5