Strain Fitness in Pseudomonas simiae WCS417 around PS417_11060

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,369,627	+				-0.3
2,369,627	+				-0.2
2,369,627	+				+2.6
2,369,628	-				-2.1
2,369,629	+				-0.6
2,369,777	+		PS417_11055	0.25	+0.1
2,370,166	-		PS417_11055	0.65	+0.6
2,370,282	-		PS417_11055	0.77	+1.4
2,370,356	-		PS417_11055	0.85	-0.1
2,370,356	-		PS417_11055	0.85	-0.1
2,370,559	-				+0.4
2,370,717	-				+0.6
2,371,071	+		PS417_11060	0.38	-1.3
2,371,115	-		PS417_11060	0.42	-0.0
2,371,290	+		PS417_11060	0.56	-2.7
2,371,320	-		PS417_11060	0.59	-0.9
2,371,320	-		PS417_11060	0.59	-2.5
2,371,437	+		PS417_11060	0.68	-0.2
2,371,912	+				+0.4
2,372,052	+		PS417_11065	0.16	-2.0
2,372,052	+		PS417_11065	0.16	+0.0
2,372,053	-		PS417_11065	0.16	-0.7
2,372,134	-		PS417_11065	0.26	+0.5
2,372,376	+		PS417_11065	0.55	-0.9
2,372,403	+		PS417_11065	0.58	+1.1
2,372,409	+		PS417_11065	0.59	-1.9
2,372,409	+		PS417_11065	0.59	-0.5
2,372,430	+		PS417_11065	0.62	+0.2
2,372,523	+		PS417_11065	0.73	+1.3
2,372,524	-		PS417_11065	0.73	+0.7
2,372,583	+		PS417_11065	0.80	-0.1
2,372,748	+				-1.9