Strain Fitness in Pseudomonas simiae WCS417 around PS417_11045

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,367,128	+		PS417_11040	0.46	+4.0
2,367,128	+		PS417_11040	0.46	-0.1
2,367,129	-		PS417_11040	0.46	-2.4
2,367,273	-		PS417_11040	0.58	-1.2
2,367,273	-		PS417_11040	0.58	+1.0
2,367,273	-		PS417_11040	0.58	-2.3
2,367,325	+		PS417_11040	0.63	+0.8
2,367,325	+		PS417_11040	0.63	-1.7
2,367,569	+		PS417_11040	0.84	+0.8
2,367,570	-		PS417_11040	0.84	+0.2
2,367,573	+		PS417_11040	0.85	-0.8
2,367,573	+		PS417_11040	0.85	-1.5
2,367,574	-		PS417_11040	0.85	-1.7
2,367,614	+		PS417_11040	0.88	-1.7
2,367,614	+		PS417_11040	0.88	-0.2
2,367,615	-		PS417_11040	0.88	-0.4
2,367,837	-				-0.6
2,367,837	-				+1.9
2,367,870	+				+1.2
2,367,885	+				+1.1
2,367,885	+				-0.0
2,367,885	+				-1.0
2,367,886	-				-3.5
2,368,116	+		PS417_11045	0.30	-0.2
2,368,116	+		PS417_11045	0.30	-0.2
2,368,117	-		PS417_11045	0.30	+2.1
2,368,117	-		PS417_11045	0.30	+0.2
2,368,451	+		PS417_11045	0.73	+2.1
2,368,452	-		PS417_11045	0.73	-2.9
2,368,631	+				-2.1
2,368,739	+				+0.5
2,368,739	+				-0.5
2,368,739	+				-0.9
2,369,299	+		PS417_11050	0.83	-2.0
2,369,362	+				+0.7
2,369,362	+				-0.4
2,369,363	-				-1.3
2,369,366	+				+0.2
2,369,627	+				-0.3
2,369,627	+				-0.2
2,369,627	+				+2.6
2,369,628	-				-2.1
2,369,629	+				-0.6