Strain Fitness in Pseudomonas simiae WCS417 around PS417_10960

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,344,724	+		PS417_10955	0.38	+0.9
2,344,727	+		PS417_10955	0.39	+1.1
2,344,728	-		PS417_10955	0.39	-0.6
2,344,743	-		PS417_10955	0.40	-2.2
2,344,772	+		PS417_10955	0.42	-0.6
2,345,126	+		PS417_10955	0.70	-0.2
2,345,586	-				-0.2
2,345,636	+				-0.1
2,345,636	+				-1.0
2,345,637	-				-3.0
2,345,664	-				+0.1
2,345,664	-				+0.6
2,345,747	+				+1.2
2,346,127	-		PS417_10960	0.24	+0.7
2,346,447	-		PS417_10960	0.37	+0.6
2,346,447	-		PS417_10960	0.37	-0.6
2,346,662	+		PS417_10960	0.46	-0.3
2,346,662	+		PS417_10960	0.46	+2.1
2,346,663	-		PS417_10960	0.46	+2.4
2,346,663	-		PS417_10960	0.46	-1.0
2,346,663	-		PS417_10960	0.46	+1.1
2,346,720	-		PS417_10960	0.48	+0.3
2,346,720	-		PS417_10960	0.48	-0.4
2,346,758	+		PS417_10960	0.50	-2.6
2,346,950	+		PS417_10960	0.58	-1.1
2,346,951	-		PS417_10960	0.58	+0.5
2,346,951	-		PS417_10960	0.58	+0.5
2,347,373	+		PS417_10960	0.75	-0.6
2,347,373	+		PS417_10960	0.75	+1.4
2,347,373	+				+1.4
2,347,374	-		PS417_10960	0.75	+0.5
2,347,374	-				+0.4
2,347,374	-		PS417_10960	0.75	+4.9
2,347,554	+		PS417_10960	0.83	+1.4
2,347,554	+		PS417_10960	0.83	+1.2
2,347,554	+		PS417_10960	0.83	+0.3
2,347,555	-		PS417_10960	0.83	+0.2
2,347,604	+		PS417_10960	0.85	+1.1
2,347,839	-				+0.4
2,347,927	+				-2.6
2,347,930	+				-1.9
2,347,930	+				+0.8
2,347,931	-				+0.0
2,347,935	+				+0.1
2,348,033	-				-0.6
2,348,055	+				-0.2
2,348,055	+				-0.6
2,348,058	+				+1.7
2,348,058	+				+1.4
2,348,059	-				+3.0
2,348,059	-				+0.4
2,348,087	-				+0.4
2,348,198	-				+0.4