Strain Fitness in Pseudomonas simiae WCS417 around PS417_10585

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,260,039	+		PS417_10580	0.39	-1.4
2,260,039	+		PS417_10580	0.39	-0.5
2,260,040	-		PS417_10580	0.40	+0.7
2,260,084	+				-0.9
2,260,085	-		PS417_10580	0.43	+2.2
2,260,244	+		PS417_10580	0.55	-0.3
2,260,245	-		PS417_10580	0.55	-0.0
2,260,319	+		PS417_10580	0.60	+0.6
2,260,408	+		PS417_10580	0.67	+0.2
2,260,627	+				+0.4
2,260,783	+				-0.5
2,260,866	+				+0.4
2,260,866	+				-0.9
2,260,867	-				+0.3
2,260,873	-				-1.0
2,261,154	+		PS417_10585	0.52	+1.6
2,261,155	-		PS417_10585	0.52	-0.1
2,261,218	-		PS417_10585	0.63	+0.7
2,261,223	+		PS417_10585	0.64	+2.0
2,261,224	-		PS417_10585	0.64	+0.2
2,261,912	+				+1.0
2,261,912	+				-0.5
2,261,913	-				+0.7
2,261,939	+				-0.0
2,261,940	-				-1.3
2,261,976	-				-0.4
2,261,976	-				-1.6
2,262,068	-				+1.3
2,262,104	+		PS417_10595	0.12	-0.9
2,262,104	+		PS417_10595	0.12	-0.8
2,262,178	-		PS417_10595	0.18	+0.2
2,262,255	+		PS417_10595	0.25	-0.2
2,262,255	+		PS417_10595	0.25	+1.9
2,262,268	+		PS417_10595	0.26	-0.3
2,262,383	-		PS417_10595	0.35	-1.6
2,262,383	-		PS417_10595	0.35	-1.5