Strain Fitness in Pseudomonas simiae WCS417 around PS417_09805

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,126,055	+		PS417_09800	0.33	-0.2
2,126,123	+		PS417_09800	0.39	-0.9
2,126,275	-		PS417_09800	0.51	+1.5
2,126,330	+		PS417_09800	0.56	-1.4
2,126,957	+				-0.7
2,126,958	-				-0.6
2,127,061	-		PS417_09805	0.13	+1.7
2,127,218	+		PS417_09805	0.26	+0.2
2,127,219	-		PS417_09805	0.26	+0.8
2,127,358	+		PS417_09805	0.38	+1.2
2,127,666	-		PS417_09805	0.63	+0.2
2,127,848	+		PS417_09805	0.78	+2.0
2,127,849	-		PS417_09805	0.78	+1.6
2,127,849	-		PS417_09805	0.78	-0.2
2,127,849	-		PS417_09805	0.78	-0.2
2,128,011	-				-0.9
2,128,011	-				+2.7
2,128,087	+				-1.7
2,128,088	-				-0.3
2,128,088	-				+1.4
2,128,165	+				-0.3
2,128,166	-				-0.2
2,128,244	-		PS417_09810	0.11	+0.6
2,128,318	+				+1.8
2,128,319	-		PS417_09810	0.17	+0.4
2,128,399	+		PS417_09810	0.23	+0.1
2,128,399	+		PS417_09810	0.23	-0.1
2,128,399	+		PS417_09810	0.23	+2.0
2,128,400	-		PS417_09810	0.23	+1.2
2,128,400	-		PS417_09810	0.23	-0.0
2,128,400	-		PS417_09810	0.23	-1.6
2,128,505	-		PS417_09810	0.31	-1.4
2,128,505	-		PS417_09810	0.31	-0.8
2,128,532	+		PS417_09810	0.33	-1.2
2,128,532	+		PS417_09810	0.33	+0.9
2,128,533	-		PS417_09810	0.34	-0.3
2,128,894	+		PS417_09810	0.62	+1.8
2,128,928	-		PS417_09810	0.65	-0.5
2,128,928	-		PS417_09810	0.65	-0.9
2,128,974	+		PS417_09810	0.68	+1.2
2,128,975	-		PS417_09810	0.68	-0.2
2,129,000	-		PS417_09810	0.70	+0.1
2,129,042	-		PS417_09810	0.74	-0.2