Strain Fitness in Pseudomonas simiae WCS417 around PS417_09670

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,096,015	+				-1.7
2,096,054	+				-0.1
2,096,145	+				-0.6
2,096,153	+				+1.2
2,096,154	-				-0.3
2,096,154	-				+0.3
2,096,154	-				-1.1
2,096,154	-				-0.4
2,096,521	+		PS417_09665	0.47	+0.5
2,096,709	+		PS417_09665	0.75	+2.8
2,096,710	-		PS417_09665	0.75	-0.4
2,096,710	-		PS417_09665	0.75	-1.7
2,096,710	-		PS417_09665	0.75	-0.7
2,096,917	-				+3.1
2,096,924	+				-1.6
2,096,925	-				+0.3
2,096,939	-				-2.1
2,097,190	+		PS417_09670	0.22	+0.5
2,097,978	+				-2.7
2,097,978	+				-0.4
2,097,978	+				+0.9
2,097,979	-				-1.1
2,098,185	-		PS417_09675	0.30	+0.4
2,098,244	+		PS417_09675	0.37	+1.6
2,098,244	+		PS417_09675	0.37	+0.3
2,098,244	+		PS417_09675	0.37	-0.2
2,098,244	+		PS417_09675	0.37	+0.2
2,098,361	+		PS417_09675	0.50	-0.1
2,098,427	+		PS417_09675	0.57	+0.3
2,098,427	+		PS417_09675	0.57	-0.1
2,098,483	-		PS417_09675	0.63	-1.6
2,098,648	+		PS417_09675	0.81	-1.7
2,098,649	-		PS417_09675	0.81	-0.9
2,098,695	-		PS417_09675	0.86	-0.2
2,098,766	+				+2.3