Strain Fitness in Pseudomonas simiae WCS417 around PS417_09415

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,039,972	+		PS417_09410	0.69	-0.1
2,039,972	+		PS417_09410	0.69	-0.2
2,039,972	+		PS417_09410	0.69	+0.1
2,039,972	+		PS417_09410	0.69	-1.4
2,039,972	+		PS417_09410	0.69	+0.4
2,039,972	+		PS417_09410	0.69	-0.9
2,039,973	-		PS417_09410	0.69	-1.0
2,040,081	+		PS417_09410	0.77	-1.4
2,040,112	-		PS417_09410	0.79	+0.4
2,040,479	+		PS417_09415	0.12	+0.2
2,040,479	+		PS417_09415	0.12	+0.3
2,040,479	+		PS417_09415	0.12	-0.1
2,040,479	+		PS417_09415	0.12	-0.3
2,040,479	+		PS417_09415	0.12	+0.7
2,040,480	-		PS417_09415	0.12	+2.8
2,040,480	-		PS417_09415	0.12	-0.9
2,040,480	-		PS417_09415	0.12	-0.7
2,040,480	-		PS417_09415	0.12	+2.0
2,040,622	-		PS417_09415	0.35	+0.6
2,040,733	+		PS417_09415	0.53	+1.4
2,040,900	+		PS417_09415	0.80	+0.4
2,040,900	+		PS417_09415	0.80	+0.0
2,040,909	+		PS417_09415	0.82	+0.9
2,040,909	+		PS417_09415	0.82	+0.1
2,041,078	+				+2.4
2,041,078	+				+0.8
2,041,078	+				-1.4
2,041,079	-				+0.8
2,041,079	-				-0.9
2,041,079	-				-1.0
2,041,536	+		PS417_09420	0.41	+1.4
2,041,537	-		PS417_09420	0.41	-0.1
2,041,537	-		PS417_09420	0.41	+0.9
2,041,674	-		PS417_09420	0.56	+0.6