Strain Fitness in Pseudomonas simiae WCS417 around PS417_09160

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,990,504	+				+0.9
1,990,508	+				+0.4
1,990,508	+				+0.2
1,990,508	+				-0.1
1,990,508	+				-0.6
1,990,509	-				-0.6
1,990,509	-				+0.7
1,990,523	+				-0.5
1,990,523	+				+0.0
1,990,830	+		PS417_09155	0.77	-1.4
1,990,990	-				+1.1
1,991,223	+		PS417_09160	0.20	-0.6
1,991,223	+		PS417_09160	0.20	-0.0
1,991,249	-		PS417_09160	0.25	+0.2
1,991,249	-		PS417_09160	0.25	-0.1
1,991,658	-				-0.1
1,991,769	+				+1.6
1,992,019	-				-1.6
1,992,213	+		PS417_09165	0.35	+2.8
1,992,213	+		PS417_09165	0.35	+0.3
1,992,213	+		PS417_09165	0.35	-0.6
1,992,213	+		PS417_09165	0.35	+0.6
1,992,226	-		PS417_09165	0.36	-1.0
1,992,313	-		PS417_09165	0.41	-0.9
1,992,396	+		PS417_09165	0.46	+1.4
1,992,396	+		PS417_09165	0.46	+0.4
1,992,397	-		PS417_09165	0.47	-0.9
1,992,397	-		PS417_09165	0.47	-0.4
1,992,474	+		PS417_09165	0.51	-0.2
1,992,475	-		PS417_09165	0.51	-1.0
1,992,478	-		PS417_09165	0.52	-3.3
1,992,486	-				-0.9
1,992,486	-		PS417_09165	0.52	+1.3
1,992,486	-		PS417_09165	0.52	+0.2
1,992,641	+		PS417_09165	0.62	-0.2
1,992,641	+		PS417_09165	0.62	+0.2
1,992,642	-		PS417_09165	0.62	-0.5