Strain Fitness in Pseudomonas simiae WCS417 around PS417_08810

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,915,655	-				+0.9
1,915,697	-				-1.6
1,915,700	+				-0.3
1,915,700	+				-0.6
1,915,701	-				-0.5
1,915,701	-				-1.0
1,915,756	-				-0.2
1,915,900	-				-0.6
1,916,082	+		PS417_08805	0.31	+1.2
1,916,082	+		PS417_08805	0.31	+0.8
1,916,083	-		PS417_08805	0.31	-0.3
1,916,092	-				-0.2
1,916,160	+		PS417_08805	0.41	+0.0
1,916,160	+		PS417_08805	0.41	+0.1
1,916,160	+		PS417_08805	0.41	-0.0
1,916,160	+				+0.4
1,916,161	-		PS417_08805	0.41	+0.1
1,916,238	+		PS417_08805	0.51	+1.0
1,916,520	+		PS417_08805	0.87	+0.6
1,916,521	-		PS417_08805	0.87	-1.4
1,916,521	-		PS417_08805	0.87	+0.7
1,916,584	+				-2.0
1,916,620	+				+1.4
1,916,645	-				+0.0
1,916,726	+				+1.4
1,916,880	+		PS417_08810	0.14	-0.5
1,916,881	-		PS417_08810	0.14	-1.5
1,916,888	-		PS417_08810	0.14	-0.4
1,916,984	-		PS417_08810	0.20	+0.7
1,917,010	+		PS417_08810	0.21	-1.7
1,917,010	+		PS417_08810	0.21	+0.4
1,917,010	+		PS417_08810	0.21	-1.0
1,917,010	+		PS417_08810	0.21	-1.4
1,917,010	+		PS417_08810	0.21	-0.0
1,917,010	+		PS417_08810	0.21	+0.4
1,917,067	+		PS417_08810	0.25	-0.2
1,917,241	+		PS417_08810	0.34	-1.5
1,917,241	+		PS417_08810	0.34	-0.1
1,917,242	-		PS417_08810	0.34	-1.5
1,917,533	-		PS417_08810	0.51	+0.4
1,918,144	+		PS417_08810	0.85	-2.1
1,918,226	-		PS417_08810	0.90	-0.3
1,918,463	+				-1.9
1,918,463	+				-1.0
1,918,463	+				+0.5
1,918,463	+				+0.4
1,918,463	+				-0.6
1,918,463	+				+0.6
1,918,510	+				-0.7
1,918,539	+				+0.4
1,918,539	+				+0.1
1,918,539	+				+0.8
1,918,539	+				-1.1
1,918,540	-				+0.9
1,918,540	-				-2.0
1,919,023	-		PS417_08815	0.82	+1.7
1,919,119	-				-1.4
1,919,119	-				+0.8
1,919,171	+				-0.8
1,919,171	+				-0.7
1,919,172	-				+0.5
1,919,172	-				-0.6
1,919,172	-				+2.2
1,919,172	-				+2.2
1,919,172	-				-0.5
1,919,172	-				+1.7
1,919,183	+				-0.8
1,919,240	-				+0.1
1,919,317	+		PS417_08820	0.17	-1.2
1,919,317	+		PS417_08820	0.17	+1.0
1,919,317	+		PS417_08820	0.17	+0.8
1,919,318	-		PS417_08820	0.17	-0.9
1,919,318	-		PS417_08820	0.17	+1.1
1,919,387	+		PS417_08820	0.32	+0.0