Strain Fitness in Pseudomonas simiae WCS417 around PS417_08585

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,874,390	+		PS417_08580	0.76	+0.1
1,874,391	-		PS417_08580	0.76	-1.4
1,874,515	-		PS417_08580	0.81	+1.0
1,874,515	-		PS417_08580	0.81	+0.6
1,874,561	-		PS417_08580	0.83	+1.4
1,874,845	-				-2.3
1,874,920	+				-0.2
1,874,921	-				-0.8
1,874,997	-				-0.4
1,874,997	-				-1.0
1,874,997	-				+0.6
1,875,081	-				-0.0
1,875,114	-				-0.6
1,875,596	+		PS417_08585	0.54	-0.6
1,875,644	+		PS417_08585	0.59	+1.1
1,875,645	-		PS417_08585	0.59	+0.6
1,875,652	+		PS417_08585	0.60	+0.9
1,875,652	+		PS417_08585	0.60	-0.6
1,875,653	-		PS417_08585	0.60	+1.4
1,875,653	-		PS417_08585	0.60	+0.6
1,875,807	+		PS417_08585	0.77	+1.4
1,876,015	+				+0.4
1,876,016	-				+0.4
1,876,044	+				-0.4
1,876,045	-				-0.1
1,876,316	+		PS417_08590	0.64	+0.5
1,876,422	-		PS417_08590	0.86	+1.0
1,876,528	-				-1.6
1,876,528	-				-0.0
1,876,882	+				+0.7
1,876,882	+				+0.2
1,876,883	-				+3.7
1,876,883	-				+0.2
1,876,883	-				+0.8