Strain Fitness in Pseudomonas simiae WCS417 around PS417_07965

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,744,368	+				-1.2
1,744,368	+				-0.3
1,744,451	-				-0.2
1,744,451	-				-0.8
1,744,778	+		PS417_07960	0.48	-0.8
1,744,778	+		PS417_07960	0.48	-3.2
1,744,778	+		PS417_07960	0.48	+0.9
1,744,778	+		PS417_07960	0.48	-1.6
1,744,779	-		PS417_07960	0.48	+1.1
1,744,779	-		PS417_07960	0.48	-0.2
1,744,779	-		PS417_07960	0.48	-1.7
1,744,779	-		PS417_07960	0.48	+2.8
1,744,782	+				+0.4
1,744,782	+		PS417_07960	0.48	+0.5
1,744,782	+		PS417_07960	0.48	-2.0
1,744,782	+		PS417_07960	0.48	-0.8
1,744,782	+		PS417_07960	0.48	-0.2
1,744,783	-		PS417_07960	0.48	+2.3
1,744,783	-		PS417_07960	0.48	+1.2
1,744,783	-		PS417_07960	0.48	-0.4
1,744,783	-		PS417_07960	0.48	+0.1
1,744,783	-		PS417_07960	0.48	+0.0
1,744,803	-		PS417_07960	0.51	+1.8
1,744,909	+		PS417_07960	0.63	-2.2
1,744,909	+				-0.2
1,744,909	+		PS417_07960	0.63	-1.6
1,744,910	-		PS417_07960	0.63	-0.2
1,744,910	-		PS417_07960	0.63	+0.4
1,744,910	-		PS417_07960	0.63	-0.2
1,745,027	-		PS417_07960	0.77	-0.6
1,745,097	+		PS417_07960	0.86	-0.4
1,745,097	+		PS417_07960	0.86	+1.4
1,745,259	-				-0.3
1,745,332	+				-0.3
1,745,333	-				+2.2
1,745,333	-				-0.3
1,745,362	+				+1.3
1,745,382	+				+0.1
1,745,554	-		PS417_07965	0.26	+0.1
1,745,713	+		PS417_07965	0.44	-2.2
1,745,720	-				-0.6
1,745,778	+		PS417_07965	0.51	+1.8
1,745,778	+		PS417_07965	0.51	+0.1
1,745,778	+		PS417_07965	0.51	+0.7
1,745,778	+		PS417_07965	0.51	-1.7
1,745,779	-		PS417_07965	0.51	-0.8
1,745,779	-		PS417_07965	0.51	-0.4
1,745,779	-		PS417_07965	0.51	+0.8
1,745,779	-		PS417_07965	0.51	-1.2
1,745,779	-		PS417_07965	0.51	-1.9
1,745,826	+		PS417_07965	0.57	-0.7
1,745,939	-		PS417_07965	0.69	+1.4
1,745,939	-		PS417_07965	0.69	-0.3
1,745,939	-		PS417_07965	0.69	-0.1
1,745,942	+		PS417_07965	0.70	-0.2
1,745,943	-		PS417_07965	0.70	+1.3
1,745,943	-		PS417_07965	0.70	+0.2
1,745,943	-		PS417_07965	0.70	+0.5
1,746,069	+		PS417_07965	0.84	+0.2
1,746,070	-		PS417_07965	0.84	-0.7
1,746,070	-		PS417_07965	0.84	-2.0
1,746,178	+				-1.3
1,746,318	-				-0.3
1,746,318	-				+0.2
1,746,345	+				-1.4
1,746,346	-				+1.2
1,746,353	+		PS417_07970	0.12	-0.5
1,746,353	+		PS417_07970	0.12	-1.6
1,746,353	+		PS417_07970	0.12	-1.1
1,746,353	+		PS417_07970	0.12	+2.2
1,746,353	+		PS417_07970	0.12	-1.2
1,746,353	+		PS417_07970	0.12	+0.3
1,746,354	-		PS417_07970	0.12	-1.4
1,746,445	+		PS417_07970	0.37	+0.7
1,746,445	+		PS417_07970	0.37	-1.5
1,746,446	-		PS417_07970	0.37	-0.2
1,746,446	-		PS417_07970	0.37	-1.4
1,746,511	+		PS417_07970	0.55	+3.1
1,746,517	+		PS417_07970	0.57	-1.1
1,746,518	-		PS417_07970	0.57	+0.4
1,746,518	-		PS417_07970	0.57	+0.0
1,746,519	+		PS417_07970	0.57	+0.0
1,746,519	+		PS417_07970	0.57	+0.6
1,746,519	+		PS417_07970	0.57	-0.6
1,746,519	+				-0.2
1,746,519	+		PS417_07970	0.57	+1.7
1,746,519	+		PS417_07970	0.57	-0.0
1,746,519	+		PS417_07970	0.57	+0.6
1,746,520	-		PS417_07970	0.57	+0.4
1,746,520	-		PS417_07970	0.57	+0.8
1,746,520	-		PS417_07970	0.57	-2.4
1,746,520	-		PS417_07970	0.57	+0.7
1,746,520	-		PS417_07970	0.57	+0.1
1,746,520	-		PS417_07970	0.57	+0.7
1,746,520	-		PS417_07970	0.57	-0.1
1,746,520	-		PS417_07970	0.57	+0.3
1,746,520	-		PS417_07970	0.57	-0.1
1,746,520	-		PS417_07970	0.57	-0.7
1,746,521	+		PS417_07970	0.58	-1.2
1,746,521	+				-0.9
1,746,521	+		PS417_07970	0.58	-2.3
1,746,521	+		PS417_07970	0.58	-0.8
1,746,521	+		PS417_07970	0.58	+2.0
1,746,521	+		PS417_07970	0.58	-0.8
1,746,521	+		PS417_07970	0.58	+1.4
1,746,522	-		PS417_07970	0.58	-1.7
1,746,522	-		PS417_07970	0.58	+1.3
1,746,522	-		PS417_07970	0.58	-0.9
1,746,522	-		PS417_07970	0.58	+0.3
1,746,522	-		PS417_07970	0.58	-1.6
1,746,559	+		PS417_07970	0.68	-2.4
1,746,559	+		PS417_07970	0.68	-0.5
1,746,559	+		PS417_07970	0.68	-0.4
1,746,560	-		PS417_07970	0.68	+0.5
1,746,560	-		PS417_07970	0.68	-1.0
1,746,560	-		PS417_07970	0.68	-0.8
1,746,607	+		PS417_07970	0.81	-0.6
1,746,634	-		PS417_07970	0.89	-1.6
1,746,634	-		PS417_07970	0.89	+0.8
1,746,644	-				+0.2
1,746,684	-				-0.2
1,746,838	+		PS417_07975	0.42	-1.4
1,747,187	-		PS417_07980	0.15	-2.7
1,747,187	-		PS417_07980	0.15	-0.5