Strain Fitness in Pseudomonas simiae WCS417 around PS417_07130

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,575,230	+		PS417_07120	0.38	-0.9
1,575,263	-		PS417_07120	0.44	+0.7
1,575,263	-		PS417_07120	0.44	+1.2
1,575,302	+		PS417_07120	0.51	-1.0
1,575,303	-		PS417_07120	0.51	-0.6
1,575,303	-		PS417_07120	0.51	+1.0
1,575,475	+		PS417_07120	0.80	-1.8
1,575,475	+		PS417_07120	0.80	-2.8
1,576,224	-				+0.0
1,576,349	+		PS417_07130	0.13	-0.2
1,576,350	-		PS417_07130	0.13	-1.3
1,576,360	-		PS417_07130	0.14	-0.1
1,576,575	+		PS417_07130	0.36	-2.2
1,576,859	+		PS417_07130	0.66	-0.2
1,576,962	+		PS417_07130	0.77	-0.4
1,576,962	+		PS417_07130	0.77	-0.3
1,576,962	+		PS417_07130	0.77	-1.5
1,576,963	-		PS417_07130	0.77	+0.0
1,576,963	-		PS417_07130	0.77	+0.5
1,576,963	-		PS417_07130	0.77	-2.5
1,577,060	-		PS417_07130	0.87	+0.1
1,577,075	+		PS417_07130	0.88	+0.4
1,577,198	+				-1.3
1,577,198	+				+3.3
1,577,199	-				+0.3
1,577,199	-				-1.2
1,577,199	-				+1.1
1,577,222	+				+0.8
1,577,223	-				+1.7
1,577,223	-				+1.1
1,577,223	-				+0.3