Strain Fitness in Pseudomonas simiae WCS417 around PS417_06925

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,531,815	+				-1.6
1,531,819	+				+0.6
1,531,861	+				-2.8
1,531,906	-				+0.5
1,531,907	+				-0.1
1,531,907	+				+1.0
1,531,907	+				+0.0
1,531,908	-				-1.2
1,531,915	-				-0.4
1,531,973	-				+0.9
1,531,998	+				-2.3
1,532,001	+				-2.1
1,532,001	+				+1.4
1,532,002	-				+0.3
1,532,014	+				-0.2
1,532,014	+				-0.4
1,532,015	-				-1.4
1,532,015	-				-1.3
1,532,053	+				-0.8
1,532,129	+		PS417_06920	0.19	-0.9
1,532,130	-		PS417_06920	0.19	-1.6
1,532,254	-		PS417_06920	0.37	-3.0
1,532,268	+		PS417_06920	0.39	-3.3
1,532,268	+		PS417_06920	0.39	-0.2
1,532,268	+		PS417_06920	0.39	+0.4
1,532,327	+		PS417_06920	0.48	-0.2
1,532,328	-		PS417_06920	0.48	-0.2
1,532,331	+		PS417_06920	0.48	+0.1
1,532,332	-		PS417_06920	0.49	+0.1
1,532,332	-		PS417_06920	0.49	+1.1
1,532,440	-		PS417_06920	0.65	+0.8
1,532,499	+		PS417_06920	0.73	+1.8
1,532,499	+		PS417_06920	0.73	+1.4
1,532,499	+		PS417_06920	0.73	+1.9
1,532,511	+		PS417_06920	0.75	-0.2
1,532,512	-		PS417_06920	0.75	-0.1
1,532,753	-				-0.8
1,533,275	+		PS417_06925	0.66	+0.4
1,533,276	-		PS417_06925	0.66	-1.4
1,533,307	+		PS417_06925	0.69	-1.2
1,533,308	-		PS417_06925	0.69	-0.6
1,533,437	+		PS417_06925	0.83	-0.7
1,533,437	+		PS417_06925	0.83	-0.2
1,533,438	-		PS417_06925	0.84	+0.4
1,533,854	-		PS417_06930	0.15	-1.7
1,534,409	-		PS417_06930	0.61	-1.6
1,534,441	+		PS417_06930	0.64	+1.4
1,534,441	+		PS417_06930	0.64	+0.4
1,534,442	-		PS417_06930	0.64	+0.4
1,534,442	-		PS417_06930	0.64	-2.0