Strain Fitness in Pseudomonas simiae WCS417 around PS417_06110

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,352,317	+				-1.3
1,352,377	+				+0.2
1,352,377	+				-1.6
1,352,377	+				-1.5
1,352,377	+				+0.2
1,352,377	+				+0.9
1,352,378	-				+2.7
1,352,378	-				+0.4
1,352,378	-				-0.6
1,352,378	-				-0.2
1,352,378	-				+0.0
1,352,378	-				+0.3
1,352,378	-				-0.6
1,352,385	+				+0.6
1,352,386	-				-0.7
1,352,554	+				-1.7
1,352,555	-				+0.3
1,352,622	+		PS417_06105	0.14	-2.3
1,352,623	-		PS417_06105	0.14	-1.8
1,352,623	-		PS417_06105	0.14	-2.0
1,352,623	-		PS417_06105	0.14	-0.3
1,352,879	-		PS417_06105	0.54	+0.2
1,352,925	+		PS417_06105	0.61	+0.5
1,352,925	+		PS417_06105	0.61	+0.1
1,352,926	-		PS417_06105	0.62	+0.0
1,352,926	-		PS417_06105	0.62	-0.2
1,353,055	+		PS417_06105	0.82	-1.3
1,353,179	+				-0.6
1,353,205	+				-0.8
1,353,214	-				+0.4
1,353,223	+				+0.2
1,353,235	+				-0.2
1,353,271	+				+0.8
1,353,272	-				+0.9
1,353,848	-		PS417_06110	0.53	-1.4
1,354,016	-				+0.4
1,354,083	+		PS417_06110	0.74	-1.3
1,354,084	-		PS417_06110	0.75	-1.2
1,354,084	-		PS417_06110	0.75	+0.3
1,354,084	-		PS417_06110	0.75	-1.9
1,354,157	+		PS417_06110	0.81	-0.2
1,354,157	+		PS417_06110	0.81	-0.4
1,354,157	+		PS417_06110	0.81	-0.6
1,354,189	+		PS417_06110	0.84	-0.8
1,354,604	+				-1.4
1,354,798	+		PS417_06115	0.14	+0.8
1,354,798	+		PS417_06115	0.14	-0.6
1,354,799	-		PS417_06115	0.14	-0.5
1,354,802	+		PS417_06115	0.14	-0.6
1,354,802	+		PS417_06115	0.14	-0.5
1,354,802	+		PS417_06115	0.14	-1.2
1,354,802	+		PS417_06115	0.14	+0.9
1,354,803	-		PS417_06115	0.14	+0.9
1,354,829	+		PS417_06115	0.15	-0.4
1,354,830	-		PS417_06115	0.15	+0.9
1,354,914	+		PS417_06115	0.18	-0.7
1,355,198	+		PS417_06115	0.27	-2.2
1,355,198	+		PS417_06115	0.27	-1.3