Strain Fitness in Pseudomonas simiae WCS417 around PS417_00600

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
120,313	-		PS417_00595	0.51	-0.2
120,382	-		PS417_00595	0.54	-0.3
120,382	-		PS417_00595	0.54	-0.2
120,388	+		PS417_00595	0.55	+0.1
120,389	-		PS417_00595	0.55	+0.1
120,453	+		PS417_00595	0.58	-1.9
120,454	-		PS417_00595	0.58	-0.3
120,475	+		PS417_00595	0.59	+0.5
120,476	-		PS417_00595	0.59	-0.1
120,566	-		PS417_00595	0.64	+2.5
121,470	+		PS417_00600	0.40	-0.5
121,471	-		PS417_00600	0.40	-0.0
121,471	-		PS417_00600	0.40	-0.3
121,471	-		PS417_00600	0.40	-3.5
121,538	-		PS417_00600	0.55	+2.0
121,538	-		PS417_00600	0.55	-0.0
121,594	+				-0.5
121,595	-		PS417_00600	0.67	-0.6
121,643	+		PS417_00600	0.78	-1.0
121,643	+		PS417_00600	0.78	-3.2
121,643	+		PS417_00600	0.78	+0.2
121,643	+		PS417_00600	0.78	+0.3
121,643	+		PS417_00600	0.78	-0.9
121,644	-		PS417_00600	0.78	+0.5
121,644	-		PS417_00600	0.78	+0.2
121,644	-		PS417_00600	0.78	-0.9
121,691	+		PS417_00600	0.88	-2.8
121,723	+				-1.5
121,744	+				+0.5
121,744	+				+0.2
121,745	-				-1.9
121,788	+				+1.5
121,967	+				-0.8
121,968	-				-0.9
122,038	-				+0.4
122,281	+		PS417_00605	0.15	-3.3
122,364	+		PS417_00605	0.18	+0.8
122,364	+		PS417_00605	0.18	+0.5
122,364	+		PS417_00605	0.18	+0.0
122,365	-		PS417_00605	0.18	-0.6
122,365	-		PS417_00605	0.18	-0.3
122,397	-		PS417_00605	0.19	-1.0
122,404	-		PS417_00605	0.19	-0.5
122,404	-		PS417_00605	0.19	-0.7
122,404	-		PS417_00605	0.19	-0.1
122,486	+		PS417_00605	0.21	+0.1
122,486	+		PS417_00605	0.21	-0.4
122,487	-		PS417_00605	0.21	-2.3
122,540	+		PS417_00605	0.23	-1.2
122,540	+		PS417_00605	0.23	+0.4
122,541	-		PS417_00605	0.23	+0.3
122,541	-		PS417_00605	0.23	+0.3
122,541	-		PS417_00605	0.23	-0.5
122,541	-		PS417_00605	0.23	-0.8
122,541	-		PS417_00605	0.23	-0.5
122,541	-		PS417_00605	0.23	-1.5
122,563	+		PS417_00605	0.24	-0.2
122,563	+		PS417_00605	0.24	-0.2
122,564	-		PS417_00605	0.24	-0.3
122,564	-		PS417_00605	0.24	+0.5
122,567	+		PS417_00605	0.24	+0.2
122,567	+		PS417_00605	0.24	-0.7
122,601	+		PS417_00605	0.25	-1.4
122,602	-		PS417_00605	0.25	-3.0