Strain Fitness in Pseudomonas simiae WCS417 around PS417_05985

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,330,517	+		PS417_05980	0.59	-1.3
1,330,518	-		PS417_05980	0.59	+0.5
1,330,592	-		PS417_05980	0.62	-0.9
1,330,848	+		PS417_05980	0.73	-0.1
1,330,849	-		PS417_05980	0.73	-0.2
1,330,932	-		PS417_05980	0.77	+0.3
1,331,138	-		PS417_05980	0.86	-1.6
1,331,138	-		PS417_05980	0.86	-0.2
1,331,141	+		PS417_05980	0.86	+0.6
1,331,142	-		PS417_05980	0.86	-0.5
1,331,231	+				-0.7
1,331,237	+				-4.7
1,331,237	+				-2.5
1,331,322	+				-0.0
1,331,323	-				+1.4
1,331,374	-				-0.2
1,331,376	+				-0.6
1,331,376	+				-1.8
1,331,376	+				-1.1
1,331,376	+				+0.4
1,331,377	-				-1.8
1,331,377	-				-0.3
1,331,752	-		PS417_05985	0.30	-0.6
1,332,168	-		PS417_05985	0.71	+0.4
1,332,262	-		PS417_05985	0.80	-2.4
1,332,307	-		PS417_05985	0.85	-3.8
1,332,495	-				-1.1
1,332,920	+		PS417_05990	0.41	+0.4
1,332,991	+		PS417_05990	0.48	-1.4
1,333,064	+		PS417_05990	0.55	-2.5
1,333,148	+		PS417_05990	0.63	-0.2
1,333,149	-		PS417_05990	0.64	-1.9
1,333,149	-		PS417_05990	0.64	-0.3
1,333,357	+		PS417_05990	0.84	+0.6
1,333,357	+		PS417_05990	0.84	+0.4