Strain Fitness in Pseudomonas simiae WCS417 around PS417_05500

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,236,266	+				+1.7
1,236,269	-				+0.3
1,236,653	-		PS417_05495	0.52	-1.2
1,236,653	-		PS417_05495	0.52	-0.1
1,236,653	-		PS417_05495	0.52	-0.6
1,236,653	-		PS417_05495	0.52	+0.8
1,236,679	+		PS417_05495	0.55	-1.0
1,236,763	+		PS417_05495	0.66	+2.1
1,236,764	-		PS417_05495	0.66	-1.3
1,236,770	+		PS417_05495	0.67	+0.1
1,236,771	-		PS417_05495	0.67	+0.6
1,236,773	-		PS417_05495	0.67	+0.7
1,236,773	-		PS417_05495	0.67	+1.1
1,236,866	-		PS417_05495	0.79	+2.6
1,237,047	+				-0.4
1,237,047	+				+0.1
1,237,047	+				-0.9
1,237,111	-				-0.7
1,237,205	+				-0.4
1,237,245	+				+0.2
1,237,246	-				-0.5
1,237,452	+		PS417_05500	0.28	-2.2
1,237,582	-		PS417_05500	0.47	+0.1
1,238,008	+				-1.3
1,238,008	+				-0.5
1,238,009	-				+3.1
1,238,035	+				+0.7
1,238,036	-				-0.7
1,238,036	-				-0.4
1,238,077	+				+1.1
1,238,077	+				+0.9
1,238,104	+		PS417_05505	0.11	+1.0
1,238,104	+		PS417_05505	0.11	-1.9
1,238,126	-		PS417_05505	0.13	-0.3
1,238,215	+		PS417_05505	0.19	-1.1
1,238,216	-		PS417_05505	0.19	-1.1
1,238,427	+		PS417_05505	0.34	+1.2
1,238,428	-		PS417_05505	0.34	+0.5
1,238,584	+		PS417_05505	0.46	-0.5
1,238,623	+		PS417_05505	0.48	+0.7
1,238,624	-		PS417_05505	0.48	-0.3
1,238,636	-		PS417_05505	0.49	+1.5
1,238,666	-				+1.5
1,238,761	+		PS417_05505	0.58	-1.1