Strain Fitness in Pseudomonas simiae WCS417 around PS417_05325

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,182,060	+				-0.0
1,182,060	+				+0.8
1,182,061	-				+1.5
1,182,108	-				+1.5
1,182,119	+				+0.5
1,182,119	+				-2.9
1,182,119	+				+0.5
1,182,318	+				+0.7
1,182,396	+				+3.1
1,182,418	+				-1.3
1,182,422	-				-0.4
1,182,465	-				+0.5
1,182,574	-		PS417_05320	0.17	-0.4
1,182,609	+		PS417_05320	0.23	+0.6
1,182,609	+		PS417_05320	0.23	+0.4
1,182,609	+		PS417_05320	0.23	-1.2
1,182,610	-		PS417_05320	0.24	-1.3
1,182,610	-		PS417_05320	0.24	-1.3
1,182,613	-		PS417_05320	0.24	-0.5
1,182,706	-		PS417_05320	0.42	-0.2
1,182,907	-		PS417_05320	0.80	+0.4
1,182,928	+		PS417_05320	0.84	-0.1
1,182,929	-		PS417_05320	0.85	-0.3
1,182,929	-		PS417_05320	0.85	-1.0
1,182,932	+		PS417_05320	0.85	-1.3
1,182,932	+		PS417_05320	0.85	+0.2
1,182,932	+		PS417_05320	0.85	-0.1
1,182,933	-		PS417_05320	0.85	-0.2
1,182,933	-		PS417_05320	0.85	+0.0
1,183,001	-				-0.6
1,183,026	+				-1.1
1,183,064	+				-1.8
1,183,064	+				+2.1
1,183,064	+				+1.1
1,183,065	-				+1.5
1,183,073	-				+0.1
1,183,116	-		PS417_05325	0.10	-0.3
1,183,263	-		PS417_05325	0.36	+2.3
1,183,448	+		PS417_05325	0.69	+0.5
1,183,448	+		PS417_05325	0.69	-0.7
1,183,449	-		PS417_05325	0.70	-1.9
1,183,611	+				+1.5
1,183,612	-				-0.2
1,183,740	+				+2.0
1,183,741	-				-0.3
1,183,743	+				+0.6
1,183,809	+				+0.3
1,183,826	-				+3.7
1,183,826	-				-1.1
1,183,857	+				+1.3
1,183,977	+		PS417_05330	0.10	-0.0
1,183,977	+		PS417_05330	0.10	+1.1
1,183,977	+		PS417_05330	0.10	-1.7
1,183,978	-		PS417_05330	0.10	-2.1
1,183,978	-		PS417_05330	0.10	-0.0
1,183,978	-		PS417_05330	0.10	-0.1
1,183,978	-		PS417_05330	0.10	+0.9
1,183,978	-		PS417_05330	0.10	-0.0
1,184,083	+		PS417_05330	0.14	-1.1
1,184,158	+		PS417_05330	0.17	-0.4
1,184,159	-		PS417_05330	0.17	+3.5
1,184,159	-		PS417_05330	0.17	+0.4
1,184,159	-		PS417_05330	0.17	+0.4
1,184,208	+		PS417_05330	0.19	+1.2
1,184,338	+		PS417_05330	0.25	+0.4
1,184,338	+		PS417_05330	0.25	+0.3
1,184,338	+		PS417_05330	0.25	-2.7
1,184,339	-		PS417_05330	0.25	+0.8
1,184,339	-		PS417_05330	0.25	-1.2
1,184,378	+		PS417_05330	0.26	-1.2
1,184,392	+		PS417_05330	0.27	-0.3
1,184,399	-		PS417_05330	0.27	+0.2
1,184,427	+		PS417_05330	0.28	+0.9
1,184,554	+		PS417_05330	0.33	-0.7