Experiment: Only library
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_04955 and PS417_04960 are separated by 82 nucleotides PS417_04960 and PS417_04965 are separated by 46 nucleotides PS417_04965 and PS417_04970 are separated by 41 nucleotides
PS417_04955: PS417_04955 - hypothetical protein, at 1,103,904 to 1,104,527
_04955
PS417_04960: PS417_04960 - hypothetical protein, at 1,104,610 to 1,105,236
_04960
PS417_04965: PS417_04965 - hypothetical protein, at 1,105,283 to 1,105,903
_04965
PS417_04970: PS417_04970 - hypothetical protein, at 1,105,945 to 1,106,574
_04970
Position (kb)
1105
1106 Strain fitness (log2 ratio)
-2
-1
0
1 at 1104.410 kb on + strand, within PS417_04955 at 1104.423 kb on + strand, within PS417_04955 at 1104.569 kb on - strand at 1104.617 kb on + strand at 1104.617 kb on + strand at 1104.804 kb on - strand, within PS417_04960 at 1104.804 kb on - strand, within PS417_04960 at 1105.261 kb on - strand at 1105.266 kb on + strand at 1105.266 kb on + strand at 1105.267 kb on - strand at 1105.267 kb on - strand at 1105.267 kb on - strand at 1105.786 kb on + strand, within PS417_04965 at 1105.787 kb on - strand, within PS417_04965 at 1105.893 kb on + strand at 1105.893 kb on + strand at 1105.894 kb on - strand at 1105.894 kb on - strand at 1105.894 kb on - strand at 1105.894 kb on - strand at 1105.894 kb on - strand at 1105.897 kb on + strand at 1105.898 kb on - strand at 1105.898 kb on - strand at 1105.953 kb on - strand at 1105.953 kb on - strand at 1105.953 kb on - strand at 1106.276 kb on + strand, within PS417_04970 at 1106.720 kb on - strand at 1106.728 kb on + strand at 1106.729 kb on - strand at 1106.781 kb on + strand at 1106.810 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Only library remove 1,104,410 + PS417_04955 0.81 -0.8 1,104,423 + PS417_04955 0.83 -2.4 1,104,569 - -1.3 1,104,617 + -0.7 1,104,617 + -0.4 1,104,804 - PS417_04960 0.31 -2.3 1,104,804 - PS417_04960 0.31 +0.7 1,105,261 - -0.2 1,105,266 + -0.0 1,105,266 + +0.6 1,105,267 - -1.7 1,105,267 - -1.7 1,105,267 - -0.0 1,105,786 + PS417_04965 0.81 -0.9 1,105,787 - PS417_04965 0.81 -1.4 1,105,893 + -1.3 1,105,893 + -1.6 1,105,894 - -0.0 1,105,894 - -0.8 1,105,894 - +0.2 1,105,894 - +0.6 1,105,894 - -1.1 1,105,897 + +0.3 1,105,898 - -0.0 1,105,898 - +0.2 1,105,953 - -0.9 1,105,953 - +1.0 1,105,953 - -0.8 1,106,276 + PS417_04970 0.53 +0.7 1,106,720 - -1.6 1,106,728 + -1.4 1,106,729 - -0.4 1,106,781 + -1.4 1,106,810 + -1.0
Or see this region's nucleotide sequence