Experiment: P3L4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3698 and Atu3699 are separated by 53 nucleotides Atu3699 and Atu3700 are separated by 253 nucleotides Atu3700 and Atu3701 are separated by 223 nucleotides
Atu3698: Atu3698 - thioredoxin, at 777,750 to 778,718
Atu3698
Atu3699: Atu3699 - hypothetical protein, at 778,772 to 779,281
Atu3699
Atu3700: Atu3700 - tRNA-Gly, at 779,535 to 779,609
Atu3700
Atu3701: Atu3701 - glutathione S-transferase, at 779,833 to 780,525
Atu3701
Position (kb) 778
779
780 Strain fitness (log2 ratio) -1
0
1
2
3 at 777.786 kb on + strand at 777.883 kb on + strand, within Atu3698 at 777.936 kb on - strand, within Atu3698 at 777.943 kb on + strand, within Atu3698 at 778.356 kb on + strand, within Atu3698 at 778.357 kb on - strand, within Atu3698 at 778.444 kb on + strand, within Atu3698 at 778.504 kb on + strand, within Atu3698 at 778.620 kb on - strand, within Atu3698 at 778.630 kb on - strand at 778.679 kb on - strand at 778.701 kb on - strand at 778.727 kb on + strand at 778.735 kb on - strand at 778.735 kb on - strand at 778.771 kb on - strand at 778.839 kb on + strand, within Atu3699 at 778.958 kb on - strand, within Atu3699 at 778.978 kb on - strand, within Atu3699 at 779.191 kb on - strand, within Atu3699 at 779.325 kb on + strand at 779.333 kb on - strand at 779.333 kb on - strand at 779.342 kb on + strand at 779.345 kb on - strand at 779.699 kb on - strand at 779.739 kb on - strand at 779.754 kb on + strand at 779.820 kb on - strand at 779.858 kb on + strand at 779.868 kb on + strand at 779.942 kb on - strand, within Atu3701 at 779.973 kb on + strand, within Atu3701 at 779.973 kb on + strand, within Atu3701 at 779.973 kb on + strand, within Atu3701 at 779.981 kb on - strand, within Atu3701 at 779.981 kb on - strand, within Atu3701 at 780.004 kb on + strand, within Atu3701 at 780.071 kb on + strand, within Atu3701 at 780.079 kb on - strand, within Atu3701 at 780.110 kb on - strand, within Atu3701 at 780.208 kb on + strand, within Atu3701 at 780.234 kb on - strand, within Atu3701
Per-strain Table
Position Strand Gene LocusTag Fraction P3L4 remove 777,786 + -0.1 777,883 + Atu3698 0.14 -1.5 777,936 - Atu3698 0.19 -0.6 777,943 + Atu3698 0.20 -1.3 778,356 + Atu3698 0.63 +1.0 778,357 - Atu3698 0.63 -0.5 778,444 + Atu3698 0.72 -0.5 778,504 + Atu3698 0.78 -1.3 778,620 - Atu3698 0.90 +1.3 778,630 - -1.1 778,679 - -0.1 778,701 - +0.6 778,727 + +1.3 778,735 - +0.2 778,735 - -0.0 778,771 - +0.3 778,839 + Atu3699 0.13 +2.3 778,958 - Atu3699 0.36 -0.1 778,978 - Atu3699 0.40 +0.5 779,191 - Atu3699 0.82 +0.3 779,325 + -1.6 779,333 - -0.1 779,333 - -0.7 779,342 + +1.9 779,345 - +0.0 779,699 - -0.3 779,739 - -0.1 779,754 + +0.6 779,820 - +3.1 779,858 + -0.3 779,868 + -1.3 779,942 - Atu3701 0.16 +0.2 779,973 + Atu3701 0.20 -0.1 779,973 + Atu3701 0.20 -0.1 779,973 + Atu3701 0.20 +0.5 779,981 - Atu3701 0.21 -0.9 779,981 - Atu3701 0.21 +0.1 780,004 + Atu3701 0.25 -1.4 780,071 + Atu3701 0.34 -0.7 780,079 - Atu3701 0.35 -0.3 780,110 - Atu3701 0.40 -0.3 780,208 + Atu3701 0.54 -0.5 780,234 - Atu3701 0.58 +0.2
Or see this region's nucleotide sequence