Strain Fitness in Pseudomonas simiae WCS417 around PS417_16930

Experiment: R2A with Fusaric 120 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 120 ug/mL
3,689,756	+		PS417_16920	0.80	-1.5
3,689,978	+				-3.3
3,689,979	-				-1.8
3,690,023	-				-1.5
3,690,023	-				+0.1
3,690,522	+				-1.6
3,690,545	+				-0.8
3,690,546	-				+1.5
3,690,590	-				+1.4
3,690,592	+				-0.9
3,690,631	-				+0.8
3,690,631	-				-0.3
3,690,667	+				-1.2
3,690,668	-				+0.2
3,690,686	+				+1.9
3,690,717	-				+0.6
3,690,717	-				-1.4
3,690,768	-				+1.5
3,690,796	+				-0.1
3,690,847	+				-0.8
3,690,848	-				+0.4
3,691,070	-		PS417_16930	0.14	-0.0
3,691,070	-		PS417_16930	0.14	+0.5
3,691,070	-		PS417_16930	0.14	+0.4
3,691,102	+				+0.1
3,691,228	+				-0.9
3,691,228	+		PS417_16930	0.20	-1.1
3,691,228	+		PS417_16930	0.20	-0.0
3,691,228	+		PS417_16930	0.20	+1.5
3,691,228	+		PS417_16930	0.20	-0.2
3,691,228	+		PS417_16930	0.20	+0.4
3,691,229	-		PS417_16930	0.20	+0.7
3,691,229	-		PS417_16930	0.20	+0.1
3,691,359	+		PS417_16930	0.24	-0.2
3,691,360	-		PS417_16930	0.24	-1.2
3,691,384	-		PS417_16930	0.25	+1.3
3,691,384	-		PS417_16930	0.25	+0.2
3,691,513	+		PS417_16930	0.30	-0.0
3,691,513	+				-0.9
3,691,755	-		PS417_16930	0.39	-0.9
3,691,862	-		PS417_16930	0.42	-0.4
3,692,137	+		PS417_16930	0.52	-1.6
3,692,237	+		PS417_16930	0.56	-0.2
3,692,284	+		PS417_16930	0.58	+2.9
3,692,555	-		PS417_16930	0.67	+0.1
3,692,758	+				+0.7
3,692,759	-		PS417_16930	0.75	-3.4
3,692,759	-				-0.6
3,692,873	+		PS417_16930	0.79	+0.1
3,692,874	-		PS417_16930	0.79	-0.3
3,693,258	+				+0.1
3,693,306	+				+1.3
3,693,307	-				+0.3
3,693,307	-				-0.5
3,693,504	-				+0.2
3,693,504	-				-0.8
3,693,649	+		PS417_16935	0.17	-0.7
3,693,694	+		PS417_16935	0.20	-0.9
3,694,005	+		PS417_16935	0.47	+0.7
3,694,353	-		PS417_16935	0.76	+0.2
3,694,353	-		PS417_16935	0.76	+0.5
3,694,353	-		PS417_16935	0.76	-0.2