Strain Fitness in Pseudomonas simiae WCS417 around PS417_10615

Experiment: R2A with Fusaric 120 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 120 ug/mL
2,264,498	-		PS417_10605	0.67	+0.8
2,264,613	+		PS417_10605	0.75	+1.2
2,264,614	-		PS417_10605	0.75	-0.3
2,264,809	+		PS417_10605	0.88	+0.2
2,264,810	-		PS417_10605	0.88	+0.1
2,264,810	-		PS417_10605	0.88	-0.0
2,264,888	+				-0.7
2,264,888	+				+0.2
2,264,973	+				-0.1
2,264,974	-				+0.0
2,264,974	-				+0.4
2,265,083	-				-0.3
2,265,153	-				+0.2
2,265,178	+				-0.3
2,265,179	-				+0.1
2,265,179	-				-0.2
2,265,475	-		PS417_10615	0.32	+0.3
2,265,475	-		PS417_10615	0.32	+0.2
2,265,475	-		PS417_10615	0.32	-0.4
2,265,475	-		PS417_10615	0.32	+0.5
2,265,928	+		PS417_10615	0.79	-0.7
2,265,929	-		PS417_10615	0.79	-0.7
2,265,929	-		PS417_10615	0.79	+1.9
2,266,057	-				-0.2
2,266,328	+				+0.2
2,266,331	+				+0.1
2,266,331	+				-0.2
2,266,331	+				-0.3
2,266,332	-				-0.1
2,266,332	-				-0.6
2,266,486	+		PS417_10620	0.30	+0.1
2,266,486	+		PS417_10620	0.30	+0.5
2,266,486	+		PS417_10620	0.30	+0.3
2,266,486	+		PS417_10620	0.30	+0.3
2,266,684	+		PS417_10620	0.62	-1.2
2,266,684	+		PS417_10620	0.62	-0.5
2,266,685	-		PS417_10620	0.62	-0.5
2,266,699	+				+1.7
2,266,699	+		PS417_10620	0.64	-1.1
2,266,700	-		PS417_10620	0.64	+1.3
2,266,700	-		PS417_10620	0.64	-0.2
2,266,717	+		PS417_10620	0.67	-0.2
2,266,717	+		PS417_10620	0.67	+0.0
2,266,718	-		PS417_10620	0.67	-0.4
2,266,718	-		PS417_10620	0.67	-0.1
2,266,724	-		PS417_10620	0.68	-0.2
2,266,733	-		PS417_10620	0.70	+0.1
2,266,741	+		PS417_10620	0.71	-0.0
2,266,750	+		PS417_10620	0.72	+1.4
2,266,750	+				-1.1
2,266,751	-		PS417_10620	0.73	+0.9
2,266,786	+		PS417_10620	0.78	-0.3
2,266,787	-		PS417_10620	0.78	-0.2
2,266,826	+		PS417_10620	0.85	+0.1
2,266,827	-		PS417_10620	0.85	-0.2
2,266,846	+		PS417_10620	0.88	-0.1
2,266,847	-		PS417_10620	0.88	+0.4
2,266,847	-		PS417_10620	0.88	-1.5
2,266,847	-		PS417_10620	0.88	-2.0
2,266,847	-		PS417_10620	0.88	+0.5
2,266,847	-		PS417_10620	0.88	-0.4
2,266,919	-				-0.3
2,266,952	+				+0.7
2,266,952	+				+0.3
2,266,953	-				-1.1
2,266,975	-				-0.5
2,266,975	-				-0.8
2,267,006	+				-0.2
2,267,007	-				+0.3
2,267,045	+				+0.5
2,267,045	+				-0.2
2,267,046	-				-0.2
2,267,047	+				-0.2
2,267,048	-				+0.7
2,267,049	+				-0.5
2,267,050	-				+1.2
2,267,050	-				+0.3
2,267,050	-				-0.5
2,267,050	-				+0.5
2,267,050	-				+0.1
2,267,050	-				-1.7
2,267,050	-				-0.1
2,267,050	-				+0.1
2,267,063	+				-1.4
2,267,064	-				-2.1