Strain Fitness in Pseudomonas simiae WCS417 around PS417_16520

Experiment: R2A with Fusaric 120 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 120 ug/mL
3,608,373	+				+0.6
3,608,374	-				+0.9
3,608,577	+				+1.1
3,608,715	+		PS417_16515	0.29	+0.8
3,608,749	-		PS417_16515	0.38	+0.3
3,609,005	-				-0.8
3,609,078	+				-0.1
3,609,079	-				-0.0
3,609,088	-				-0.3
3,609,088	-				+0.1
3,609,128	+				-0.5
3,609,128	+				+0.2
3,609,162	+				-0.4
3,609,162	+				-1.1
3,609,163	-				-0.3
3,609,199	+				-0.4
3,609,200	-				-0.6
3,609,200	-				+0.2
3,609,302	+		PS417_16520	0.37	-0.7
3,609,302	+		PS417_16520	0.37	-0.3
3,609,303	-		PS417_16520	0.37	-0.4
3,609,457	-				-0.3
3,609,561	+				-0.6
3,609,562	-				+0.4
3,609,562	-				-0.4
3,609,565	+				-0.5
3,609,566	-				+0.4
3,609,566	-				-0.5
3,609,623	-				-0.2
3,609,639	+				-0.4
3,609,639	+				-0.7
3,609,639	+				-0.6
3,609,639	+				+3.1
3,609,640	-				-0.7
3,609,640	-				-0.1
3,609,640	-				+0.0
3,609,644	+				+0.5
3,609,644	+				+0.1
3,609,777	+		PS417_16525	0.17	+0.4
3,609,777	+		PS417_16525	0.17	+0.5
3,609,790	+		PS417_16525	0.18	-0.6
3,609,888	+		PS417_16525	0.26	+0.1
3,609,889	-		PS417_16525	0.26	+0.0
3,609,939	-		PS417_16525	0.30	+0.3
3,609,939	-		PS417_16525	0.30	+1.7
3,609,939	-		PS417_16525	0.30	-0.2
3,610,112	-		PS417_16525	0.44	+0.2
3,610,112	-		PS417_16525	0.44	-0.3
3,610,161	-		PS417_16525	0.48	-0.6
3,610,164	+		PS417_16525	0.48	-0.2
3,610,164	+		PS417_16525	0.48	-0.8
3,610,165	-		PS417_16525	0.48	-0.1
3,610,165	-		PS417_16525	0.48	-0.5
3,610,165	-		PS417_16525	0.48	+0.1
3,610,220	-		PS417_16525	0.53	+0.0
3,610,220	-		PS417_16525	0.53	-1.5
3,610,287	-				-2.1
3,610,332	+		PS417_16525	0.61	-0.5
3,610,333	-		PS417_16525	0.61	-0.7
3,610,396	+		PS417_16525	0.67	-0.7
3,610,437	+		PS417_16525	0.70	-0.3
3,610,437	+		PS417_16525	0.70	-0.2
3,610,438	-		PS417_16525	0.70	+0.2
3,610,464	-		PS417_16525	0.72	+1.3