Strain Fitness in Pseudomonas simiae WCS417 around PS417_25400

Experiment: R2A with Fusaric 120 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 120 ug/mL
5,501,816	+		PS417_25395	0.69	+0.8
5,501,816	+		PS417_25395	0.69	+0.2
5,501,816	+		PS417_25395	0.69	-0.1
5,501,917	-		PS417_25395	0.72	+1.4
5,501,977	+		PS417_25395	0.74	+0.0
5,502,145	+		PS417_25395	0.80	+0.2
5,502,145	+		PS417_25395	0.80	+0.2
5,502,145	+		PS417_25395	0.80	+0.1
5,502,146	-		PS417_25395	0.80	+0.1
5,502,146	-		PS417_25395	0.80	-0.5
5,502,146	-		PS417_25395	0.80	-0.0
5,502,146	-		PS417_25395	0.80	+0.0
5,502,146	-		PS417_25395	0.80	-0.0
5,502,146	-		PS417_25395	0.80	-0.4
5,502,178	+		PS417_25395	0.81	+0.5
5,502,178	+		PS417_25395	0.81	-0.2
5,502,178	+		PS417_25395	0.81	+1.0
5,502,205	+		PS417_25395	0.82	+0.2
5,502,205	+		PS417_25395	0.82	-0.4
5,502,205	+		PS417_25395	0.82	+0.5
5,502,205	+		PS417_25395	0.82	-0.5
5,502,206	-		PS417_25395	0.82	-0.1
5,502,206	-		PS417_25395	0.82	-0.2
5,502,325	+		PS417_25395	0.87	-0.6
5,502,325	+		PS417_25395	0.87	-0.7
5,502,326	-		PS417_25395	0.87	+0.1
5,502,326	-		PS417_25395	0.87	-0.4
5,502,326	-		PS417_25395	0.87	+1.2
5,502,326	-		PS417_25395	0.87	-1.1
5,502,427	+				+0.5
5,502,428	-				+0.0
5,502,428	-				-0.6
5,502,428	-				+0.0
5,502,428	-				-0.1
5,502,428	-				+0.6
5,502,470	+				+0.7
5,502,471	-				+0.0
5,502,621	-				-0.4
5,502,668	-				-0.1
5,502,670	+				+0.2
5,502,670	+				+0.5
5,502,670	+				+0.4
5,502,671	-				+0.4
5,502,671	-				+0.2
5,502,792	-				-1.5
5,502,899	+		PS417_25400	0.27	-0.8
5,502,899	+		PS417_25400	0.27	-0.6
5,502,900	-		PS417_25400	0.28	-0.4
5,502,900	-		PS417_25400	0.28	-0.5
5,502,900	-		PS417_25400	0.28	+0.1
5,502,900	-		PS417_25400	0.28	-1.7
5,502,956	+		PS417_25400	0.40	-0.2
5,502,956	+		PS417_25400	0.40	+0.5
5,502,957	-		PS417_25400	0.40	-1.3
5,502,957	-		PS417_25400	0.40	-0.0
5,502,957	-		PS417_25400	0.40	-0.7
5,502,957	-		PS417_25400	0.40	-1.4
5,502,992	-		PS417_25400	0.47	-0.4
5,503,107	+		PS417_25400	0.72	-0.3
5,503,142	+		PS417_25400	0.80	-2.4
5,503,216	+				-1.7
5,503,217	-				+0.2
5,503,242	+				+1.2
5,503,243	-				-1.0
5,503,243	-				+0.2
5,503,394	-				+0.4
5,503,394	-				+0.1
5,503,453	+				+0.0
5,503,579	+		PS417_25405	0.13	+0.4
5,503,580	-		PS417_25405	0.13	-1.1
5,503,580	-		PS417_25405	0.13	+0.1
5,503,583	-		PS417_25405	0.13	-0.0
5,503,607	-		PS417_25405	0.15	-0.2
5,503,678	+		PS417_25405	0.20	+1.0
5,503,678	+		PS417_25405	0.20	+0.8
5,503,679	-		PS417_25405	0.20	-0.4
5,503,693	+		PS417_25405	0.21	+0.5
5,503,694	-		PS417_25405	0.21	+0.5
5,503,747	+		PS417_25405	0.24	-0.7
5,503,747	+		PS417_25405	0.24	-0.1
5,503,747	+		PS417_25405	0.24	+0.0
5,503,764	-		PS417_25405	0.26	+0.8
5,503,853	+		PS417_25405	0.32	-0.2
5,503,854	-		PS417_25405	0.32	+0.2
5,503,854	-		PS417_25405	0.32	-0.0
5,503,854	-		PS417_25405	0.32	-1.4
5,503,854	-		PS417_25405	0.32	-2.1
5,503,872	+		PS417_25405	0.33	-0.3
5,503,873	-		PS417_25405	0.33	+1.0
5,503,928	-		PS417_25405	0.37	+1.0
5,503,946	+		PS417_25405	0.38	-0.1
5,504,204	+		PS417_25405	0.56	-0.9