Strain Fitness in Pseudomonas simiae WCS417 around PS417_02415
Experiment: R2A with Fusaric 120 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A with Fusaric 120 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 553,320 | - | -1.4 | |||
| 553,595 | - | PS417_02415 | 0.15 | +0.4 | |
| 553,622 | + | PS417_02415 | 0.17 | -0.8 | |
| 553,622 | + | PS417_02415 | 0.17 | -1.7 | |
| 553,623 | - | PS417_02415 | 0.17 | -0.5 | |
| 553,766 | + | PS417_02415 | 0.29 | -2.1 | |
| 554,316 | + | PS417_02415 | 0.74 | +0.1 | |
| 554,317 | - | PS417_02415 | 0.74 | -0.9 | |
| 554,707 | - | +1.5 | |||
| 554,759 | + | +0.2 | |||
| 554,760 | - | +0.2 | |||
| 554,760 | - | +0.2 | |||
| 555,622 | - | -0.5 |
Or see this region's nucleotide sequence