Strain Fitness in Pseudomonas simiae WCS417 around PS417_22805

Experiment: R2A with Fusaric 120 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 120 ug/mL
4,940,069	-		PS417_22795	0.89	+0.2
4,940,163	+				+0.5
4,940,164	-				-0.2
4,940,164	-				+0.2
4,940,254	+				-0.2
4,940,297	+		PS417_22800	0.15	+0.7
4,940,297	+		PS417_22800	0.15	+2.8
4,940,299	+		PS417_22800	0.15	+2.0
4,940,313	+		PS417_22800	0.17	-0.2
4,940,390	+				-0.0
4,940,516	+		PS417_22800	0.45	+0.4
4,940,570	+				+0.2
4,940,571	-		PS417_22800	0.52	+0.2
4,940,591	+		PS417_22800	0.55	+0.0
4,940,661	-		PS417_22800	0.65	-0.8
4,940,804	+		PS417_22800	0.84	-0.2
4,940,805	-		PS417_22800	0.84	-0.6
4,940,922	+				+0.4
4,940,923	-				-0.0
4,940,923	-				-0.1
4,940,980	+				-0.6
4,940,980	+				-0.5
4,940,981	-				-0.1
4,941,174	+		PS417_22805	0.15	-1.4
4,941,175	-		PS417_22805	0.15	-1.4
4,941,255	+		PS417_22805	0.23	-1.0
4,941,255	+		PS417_22805	0.23	+1.4
4,941,255	+		PS417_22805	0.23	-0.6
4,941,255	+		PS417_22805	0.23	-0.8
4,941,256	-		PS417_22805	0.23	-0.8
4,941,256	-		PS417_22805	0.23	-0.7
4,941,279	+		PS417_22805	0.25	-0.6
4,941,280	-				+1.8
4,941,280	-		PS417_22805	0.25	-0.9
4,941,307	-		PS417_22805	0.28	-0.2
4,941,307	-		PS417_22805	0.28	-0.5
4,941,312	+		PS417_22805	0.28	+0.2
4,941,375	+		PS417_22805	0.35	+0.6
4,941,435	+		PS417_22805	0.41	-0.7
4,941,489	+		PS417_22805	0.46	-0.8
4,941,489	+		PS417_22805	0.46	-0.6
4,941,518	-		PS417_22805	0.49	-0.4
4,941,544	-		PS417_22805	0.51	-1.4
4,941,544	-		PS417_22805	0.51	-1.7
4,941,636	+		PS417_22805	0.61	-0.6
4,941,636	+		PS417_22805	0.61	+0.7
4,941,758	+		PS417_22805	0.73	-1.4
4,941,759	-		PS417_22805	0.73	-0.4
4,941,759	-		PS417_22805	0.73	-0.7
4,941,807	+		PS417_22805	0.77	-1.5
4,941,889	-		PS417_22805	0.86	-3.4
4,942,033	+				-0.7
4,942,033	+				-0.5
4,942,033	+				+0.3
4,942,033	+				-0.1
4,942,034	-				-0.7
4,942,034	-				+0.1
4,942,082	-				+0.1
4,942,086	-				+0.5
4,942,086	-				+0.8
4,942,093	+				-1.0
4,942,112	+				-0.6
4,942,112	+				-1.2
4,942,147	-				+1.3
4,942,159	+				-1.3
4,942,253	+		PS417_22810	0.16	-0.2
4,942,253	+		PS417_22810	0.16	+0.3
4,942,507	+		PS417_22810	0.88	-0.6
4,942,630	-				+1.5
4,942,686	+				+1.0
4,942,687	-				+1.8
4,942,687	-				+1.0
4,942,687	-				+2.6
4,942,687	-				+1.9
4,942,687	-				+1.2
4,942,788	-		PS417_22815	0.13	+1.3
4,942,796	-		PS417_22815	0.13	+1.8