Strain Fitness in Pseudomonas simiae WCS417 around PS417_12595
Experiment: R2A with Fusaric 120 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A with Fusaric 120 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 2,742,276 | + | -0.1 | |||
| 2,742,276 | + | +0.8 | |||
| 2,742,277 | - | -2.1 | |||
| 2,742,292 | + | -0.2 | |||
| 2,742,292 | + | -0.1 | |||
| 2,742,293 | - | -2.1 | |||
| 2,742,293 | - | -0.1 | |||
| 2,742,293 | - | -0.3 | |||
| 2,742,293 | - | -0.3 | |||
| 2,742,295 | - | +0.7 | |||
| 2,742,361 | + | -0.7 | |||
| 2,742,757 | + | PS417_12595 | 0.42 | -0.0 | |
| 2,742,940 | + | PS417_12595 | 0.68 | -1.5 | |
| 2,743,132 | + | +0.0 | |||
| 2,743,228 | + | +2.1 | |||
| 2,743,327 | + | PS417_12600 | 0.12 | +2.1 |
Or see this region's nucleotide sequence