Strain Fitness in Pseudomonas simiae WCS417 around PS417_21275

Experiment: R2A with Fusaric 120 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 120 ug/mL
4,623,101	-		PS417_21265	0.38	+0.3
4,623,305	-				+0.1
4,623,311	+				+0.6
4,623,543	+		PS417_21270	0.25	+2.2
4,623,543	+		PS417_21270	0.25	+2.2
4,623,866	-				+1.7
4,623,913	+				+1.7
4,623,913	+				+1.6
4,623,914	-				-0.2
4,623,914	-				-1.6
4,623,937	+				+1.3
4,623,937	+				+1.2
4,623,937	+				+2.4
4,623,937	+				+2.7
4,623,937	+				+1.8
4,623,938	-				+0.4
4,623,938	-				+0.2
4,623,978	-				-0.0
4,623,985	+				-0.5
4,623,987	+				+0.4
4,624,038	+				+0.4
4,624,192	-		PS417_21275	0.13	+0.4
4,624,192	-		PS417_21275	0.13	-1.7
4,624,285	+		PS417_21275	0.19	-0.7
4,624,285	+		PS417_21275	0.19	-0.3
4,624,285	+		PS417_21275	0.19	-0.7
4,624,285	+		PS417_21275	0.19	-0.7
4,624,285	+		PS417_21275	0.19	-1.2
4,624,342	+		PS417_21275	0.23	-1.1
4,624,342	+		PS417_21275	0.23	+0.0
4,624,343	-		PS417_21275	0.23	-0.5
4,624,343	-				-1.2
4,624,343	-		PS417_21275	0.23	-1.3
4,624,343	-		PS417_21275	0.23	-1.0
4,624,456	+		PS417_21275	0.31	-1.4
4,624,456	+		PS417_21275	0.31	-2.1
4,624,456	+		PS417_21275	0.31	-2.3
4,624,456	+				-1.2
4,624,456	+		PS417_21275	0.31	-2.9
4,624,457	-		PS417_21275	0.31	-1.6
4,624,457	-		PS417_21275	0.31	+0.6
4,624,522	+		PS417_21275	0.35	-1.3
4,624,522	+		PS417_21275	0.35	-0.6
4,624,522	+		PS417_21275	0.35	-0.6
4,624,522	+		PS417_21275	0.35	-1.2
4,624,522	+		PS417_21275	0.35	-1.3
4,624,523	-		PS417_21275	0.36	-0.5
4,624,523	-		PS417_21275	0.36	-0.5
4,624,546	+		PS417_21275	0.37	+0.1
4,624,594	+		PS417_21275	0.40	-1.7
4,624,594	+		PS417_21275	0.40	-1.4
4,624,595	-		PS417_21275	0.41	-0.4
4,624,595	-		PS417_21275	0.41	-1.6
4,624,595	-		PS417_21275	0.41	-1.8
4,624,598	+		PS417_21275	0.41	-0.8
4,624,599	-		PS417_21275	0.41	-0.6
4,624,837	+		PS417_21275	0.57	+0.4
4,624,837	+		PS417_21275	0.57	+0.2
4,624,837	+		PS417_21275	0.57	-0.2
4,624,838	-		PS417_21275	0.57	-1.6
4,624,838	-		PS417_21275	0.57	-0.2
4,625,018	-		PS417_21275	0.70	-2.5
4,625,018	-		PS417_21275	0.70	-0.3
4,625,018	-		PS417_21275	0.70	-0.7
4,625,018	-		PS417_21275	0.70	-0.0
4,625,086	-		PS417_21275	0.75	-0.3
4,625,089	+		PS417_21275	0.75	-1.6
4,625,248	+		PS417_21275	0.86	-0.8
4,625,248	+		PS417_21275	0.86	-1.1
4,625,249	-		PS417_21275	0.86	+0.6
4,625,384	-				-0.6
4,625,384	-				-1.2
4,625,424	-				-0.7
4,625,424	-				-1.4
4,625,432	-				-0.2
4,625,510	-				+0.6
4,625,517	+				-1.0
4,625,599	+				-1.0
4,625,599	+				-1.1
4,625,600	-				-0.4
4,625,669	-				-0.6
4,625,670	+				-0.4
4,625,671	-				-0.0
4,625,709	+				-0.1
4,625,709	+				-0.4
4,625,710	-				-0.3
4,625,710	-				-1.0
4,625,833	+		PS417_21280	0.14	-0.3
4,625,834	-		PS417_21280	0.14	-0.5
4,625,880	+		PS417_21280	0.19	-0.5
4,625,881	-		PS417_21280	0.20	-1.6
4,625,881	-		PS417_21280	0.20	-0.7
4,625,943	-		PS417_21280	0.27	-0.8
4,626,272	-		PS417_21280	0.68	+0.4
4,626,286	+		PS417_21280	0.69	-0.1
4,626,292	+				-1.0
4,626,293	-		PS417_21280	0.70	+1.0
4,626,323	-		PS417_21280	0.74	-0.7