Strain Fitness in Pseudomonas simiae WCS417 around PS417_15780

Experiment: R2A with Fusaric 120 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 120 ug/mL
3,458,791	-		PS417_15775	0.30	-0.4
3,458,791	-		PS417_15775	0.30	-0.7
3,458,934	+		PS417_15775	0.42	-0.2
3,458,934	+		PS417_15775	0.42	+0.3
3,459,639	+				-1.0
3,459,640	-				-0.1
3,459,640	-				-0.4
3,459,705	-		PS417_15780	0.11	-1.2
3,459,750	+		PS417_15780	0.22	-0.1
3,459,751	-		PS417_15780	0.22	-0.9
3,459,767	+				+1.5
3,459,921	+		PS417_15780	0.60	-0.3
3,459,922	-		PS417_15780	0.60	-0.1
3,460,086	+				+0.0
3,460,086	+				-0.4
3,460,087	-				+0.1
3,460,091	-				-0.1
3,460,193	-				-1.8
3,460,301	-				-0.1
3,460,372	+		PS417_15785	0.15	-0.3
3,460,372	+		PS417_15785	0.15	+0.2
3,460,373	-		PS417_15785	0.15	+0.3
3,460,373	-		PS417_15785	0.15	-0.1
3,460,373	-		PS417_15785	0.15	-0.3
3,460,373	-		PS417_15785	0.15	+0.1
3,460,373	-		PS417_15785	0.15	-0.6
3,460,420	+		PS417_15785	0.19	-0.4
3,460,421	-		PS417_15785	0.19	+0.1
3,460,421	-		PS417_15785	0.19	-0.2
3,460,421	-		PS417_15785	0.19	+0.1
3,460,426	+		PS417_15785	0.19	+0.4
3,460,426	+		PS417_15785	0.19	+0.1
3,460,426	+		PS417_15785	0.19	-1.0
3,460,426	+		PS417_15785	0.19	-0.3
3,460,426	+		PS417_15785	0.19	+0.2
3,460,426	+		PS417_15785	0.19	-0.2
3,460,426	+				-0.3
3,460,427	-		PS417_15785	0.19	-0.5
3,460,427	-		PS417_15785	0.19	-0.2
3,460,427	-		PS417_15785	0.19	+0.1
3,460,427	-		PS417_15785	0.19	-0.4
3,460,427	-		PS417_15785	0.19	-0.1
3,460,427	-		PS417_15785	0.19	-0.1
3,460,427	-		PS417_15785	0.19	+0.2
3,460,427	-				+0.3
3,460,588	+		PS417_15785	0.32	-2.1
3,460,588	+		PS417_15785	0.32	+1.5
3,460,588	+		PS417_15785	0.32	+0.7
3,460,667	-		PS417_15785	0.38	+0.1
3,460,766	+		PS417_15785	0.45	+0.9
3,460,816	+		PS417_15785	0.49	-1.0
3,460,816	+		PS417_15785	0.49	-0.6
3,460,817	-		PS417_15785	0.49	+0.4
3,460,819	+		PS417_15785	0.49	+0.9
3,460,819	+		PS417_15785	0.49	+0.5
3,460,820	-		PS417_15785	0.49	+0.2
3,460,871	-		PS417_15785	0.53	-1.1