Strain Fitness in Pseudomonas simiae WCS417 around PS417_14805
Experiment: R2A with Fusaric 120 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A with Fusaric 120 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 3,235,379 | + | PS417_14800 | 0.62 | +0.2 | |
| 3,235,379 | + | PS417_14800 | 0.62 | -0.3 | |
| 3,235,527 | + | +0.7 | |||
| 3,236,016 | - | PS417_14800 | 0.87 | -0.1 | |
| 3,236,062 | + | PS417_14800 | 0.89 | +0.2 | |
| 3,236,062 | + | PS417_14800 | 0.89 | -0.0 | |
| 3,236,564 | + | PS417_14805 | 0.27 | +0.5 | |
| 3,236,565 | - | PS417_14805 | 0.27 | +0.9 | |
| 3,237,176 | + | +0.3 | |||
| 3,237,249 | - | -0.3 | |||
| 3,237,419 | - | PS417_14810 | 0.13 | +0.2 | |
| 3,237,973 | + | +0.4 | |||
| 3,238,012 | + | PS417_14810 | 0.62 | -1.4 | |
| 3,238,013 | - | PS417_14810 | 0.62 | -1.0 |
Or see this region's nucleotide sequence