Experiment: R2A with Fusaric 120 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14245 and PS417_14250 overlap by 1 nucleotides PS417_14250 and PS417_14255 are separated by 27 nucleotides PS417_14255 and PS417_14260 are separated by 76 nucleotides PS417_14260 and PS417_14265 overlap by 1 nucleotides
PS417_14245: PS417_14245 - hypothetical protein, at 3,118,090 to 3,118,680
_14245
PS417_14250: PS417_14250 - hypothetical protein, at 3,118,680 to 3,119,378
_14250
PS417_14255: PS417_14255 - phosphate import ATP-binding protein PstB, at 3,119,406 to 3,120,167
_14255
PS417_14260: PS417_14260 - phosphate ABC transporter permease, at 3,120,244 to 3,121,137
_14260
PS417_14265: PS417_14265 - phosphate ABC transporter permease, at 3,121,137 to 3,122,102
_14265
Position (kb)
3119
3120
3121 Strain fitness (log2 ratio)
-1
0
1
2 at 3118.427 kb on + strand, within PS417_14245 at 3118.427 kb on + strand, within PS417_14245 at 3118.427 kb on + strand, within PS417_14245 at 3118.428 kb on - strand, within PS417_14245 at 3118.748 kb on + strand at 3118.748 kb on + strand at 3118.749 kb on - strand at 3118.795 kb on + strand, within PS417_14250 at 3118.912 kb on + strand, within PS417_14250 at 3118.980 kb on + strand, within PS417_14250 at 3118.981 kb on - strand, within PS417_14250 at 3118.981 kb on - strand, within PS417_14250 at 3118.985 kb on - strand, within PS417_14250 at 3118.985 kb on - strand, within PS417_14250 at 3118.985 kb on - strand, within PS417_14250 at 3119.032 kb on + strand, within PS417_14250 at 3119.041 kb on + strand, within PS417_14250 at 3119.042 kb on - strand, within PS417_14250 at 3119.110 kb on + strand, within PS417_14250 at 3119.146 kb on - strand, within PS417_14250 at 3119.215 kb on + strand, within PS417_14250 at 3119.215 kb on + strand, within PS417_14250 at 3119.216 kb on - strand, within PS417_14250 at 3119.216 kb on - strand, within PS417_14250 at 3119.216 kb on - strand, within PS417_14250 at 3119.429 kb on - strand at 3119.596 kb on + strand, within PS417_14255 at 3119.597 kb on - strand, within PS417_14255 at 3119.923 kb on + strand, within PS417_14255 at 3120.113 kb on + strand at 3120.114 kb on - strand at 3120.216 kb on + strand at 3120.216 kb on + strand at 3120.216 kb on + strand at 3120.217 kb on - strand at 3120.245 kb on + strand at 3120.245 kb on + strand at 3120.245 kb on + strand at 3120.246 kb on - strand at 3120.246 kb on - strand at 3120.248 kb on + strand at 3120.267 kb on + strand at 3120.369 kb on - strand, within PS417_14260 at 3120.426 kb on - strand, within PS417_14260 at 3120.581 kb on + strand, within PS417_14260 at 3120.645 kb on + strand, within PS417_14260 at 3120.995 kb on + strand, within PS417_14260 at 3120.996 kb on - strand at 3121.122 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Fusaric 120 ug/mL remove 3,118,427 + PS417_14245 0.57 +0.5 3,118,427 + PS417_14245 0.57 +1.7 3,118,427 + PS417_14245 0.57 -0.9 3,118,428 - PS417_14245 0.57 -0.6 3,118,748 + +1.7 3,118,748 + -0.4 3,118,749 - -0.3 3,118,795 + PS417_14250 0.16 -1.1 3,118,912 + PS417_14250 0.33 -0.5 3,118,980 + PS417_14250 0.43 +0.4 3,118,981 - PS417_14250 0.43 +0.6 3,118,981 - PS417_14250 0.43 -0.5 3,118,985 - PS417_14250 0.44 -0.2 3,118,985 - PS417_14250 0.44 -0.6 3,118,985 - PS417_14250 0.44 -0.4 3,119,032 + PS417_14250 0.50 +0.3 3,119,041 + PS417_14250 0.52 -0.5 3,119,042 - PS417_14250 0.52 -0.8 3,119,110 + PS417_14250 0.62 +0.3 3,119,146 - PS417_14250 0.67 -0.3 3,119,215 + PS417_14250 0.77 +0.5 3,119,215 + PS417_14250 0.77 -0.5 3,119,216 - PS417_14250 0.77 -1.2 3,119,216 - PS417_14250 0.77 -0.4 3,119,216 - PS417_14250 0.77 -0.9 3,119,429 - -0.1 3,119,596 + PS417_14255 0.25 +0.8 3,119,597 - PS417_14255 0.25 +1.9 3,119,923 + PS417_14255 0.68 -0.2 3,120,113 + +1.3 3,120,114 - -0.2 3,120,216 + -0.1 3,120,216 + +0.5 3,120,216 + +0.9 3,120,217 - -0.7 3,120,245 + -0.2 3,120,245 + +0.9 3,120,245 + +0.5 3,120,246 - -0.2 3,120,246 - +1.0 3,120,248 + +1.0 3,120,267 + -0.3 3,120,369 - PS417_14260 0.14 -0.4 3,120,426 - PS417_14260 0.20 +0.2 3,120,581 + PS417_14260 0.38 -0.1 3,120,645 + PS417_14260 0.45 +0.2 3,120,995 + PS417_14260 0.84 +0.1 3,120,996 - +0.3 3,121,122 + +0.7
Or see this region's nucleotide sequence