Strain Fitness in Pseudomonas simiae WCS417 around PS417_13255
Experiment: R2A with Fusaric 120 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A with Fusaric 120 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 2,898,971 | - | +0.7 | |||
| 2,898,971 | - | PS417_13250 | 0.65 | -0.3 | |
| 2,898,971 | - | PS417_13250 | 0.65 | +1.0 | |
| 2,899,370 | + | PS417_13250 | 0.88 | +0.8 | |
| 2,899,371 | - | PS417_13250 | 0.88 | +0.3 | |
| 2,899,561 | + | -0.1 | |||
| 2,899,562 | - | +0.3 | |||
| 2,899,562 | - | +0.1 | |||
| 2,899,562 | - | +0.2 | |||
| 2,900,801 | - | PS417_13255 | 0.70 | +0.4 | |
| 2,900,801 | - | PS417_13255 | 0.70 | +0.6 | |
| 2,901,508 | - | -0.3 | |||
| 2,901,639 | + | -0.7 | |||
| 2,901,871 | - | PS417_13260 | 0.10 | -1.6 | |
| 2,902,095 | + | PS417_13260 | 0.14 | -0.6 |
Or see this region's nucleotide sequence