Strain Fitness in Pseudomonas simiae WCS417 around PS417_08225
Experiment: R2A with Fusaric 120 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A with Fusaric 120 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,800,702 | - | PS417_08220 | 0.11 | -0.4 | |
| 1,800,836 | - | +0.5 | |||
| 1,800,938 | - | -0.4 | |||
| 1,802,276 | - | PS417_08225 | 0.43 | +0.5 | |
| 1,802,477 | - | PS417_08225 | 0.55 | +0.9 | |
| 1,802,517 | - | PS417_08225 | 0.58 | -0.2 | |
| 1,802,521 | - | PS417_08225 | 0.58 | +0.1 | |
| 1,802,910 | - | PS417_08225 | 0.80 | +0.7 | |
| 1,802,933 | - | PS417_08225 | 0.82 | +0.2 | |
| 1,802,933 | - | PS417_08225 | 0.82 | +0.9 | |
| 1,803,188 | - | +0.9 | |||
| 1,803,325 | - | +0.3 | |||
| 1,803,407 | - | PS417_08230 | 0.12 | +0.5 | |
| 1,803,436 | - | PS417_08230 | 0.14 | -0.2 | |
| 1,803,725 | - | PS417_08230 | 0.36 | -0.7 |
Or see this region's nucleotide sequence