Strain Fitness in Agrobacterium fabrum C58 around Atu4633

Experiment: Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0
1,782,794	-		Atu4632	0.57	-1.1
1,782,898	+		Atu4632	0.61	+0.1
1,783,032	-		Atu4632	0.67	-1.6
1,783,060	+		Atu4632	0.68	+0.8
1,783,060	+		Atu4632	0.68	+0.2
1,783,080	-		Atu4632	0.69	-0.1
1,783,080	-		Atu4632	0.69	+1.1
1,783,173	-		Atu4632	0.73	+0.2
1,783,198	+		Atu4632	0.74	-0.2
1,783,198	+		Atu4632	0.74	+0.1
1,783,262	+		Atu4632	0.77	-0.1
1,783,262	-		Atu4632	0.77	+0.2
1,783,350	-		Atu4632	0.81	+0.1
1,783,366	-		Atu4632	0.82	+0.6
1,783,390	+		Atu4632	0.83	+1.0
1,783,394	-		Atu4632	0.83	+0.2
1,783,590	+				+0.5
1,783,650	-				-1.2
1,783,678	+				+0.0
1,783,763	+				+0.9
1,783,809	-		Atu4633	0.11	+0.1
1,783,921	+		Atu4633	0.30	+0.1
1,783,929	-		Atu4633	0.32	+2.3
1,783,939	-		Atu4633	0.33	+0.7
1,784,034	+		Atu4633	0.49	+0.1
1,784,061	+		Atu4633	0.54	+0.6
1,784,135	+		Atu4633	0.67	-0.1
1,784,169	+		Atu4633	0.72	+0.0
1,784,287	-				+0.4
1,784,302	-				+1.0
1,784,312	+				-0.3
1,784,374	+				+0.2
1,784,432	+		Atu4634	0.16	-0.5
1,784,517	-		Atu4634	0.29	+1.7
1,784,519	+		Atu4634	0.29	+1.2
1,784,667	-		Atu4634	0.52	-0.4
1,784,675	+		Atu4634	0.53	+0.1
1,784,684	-		Atu4634	0.55	+0.3
1,784,720	-		Atu4634	0.60	+0.7
1,784,843	+		Atu4634	0.80	+0.2
1,785,139	-				+0.0
1,785,238	+		Atu4635	0.28	-0.4