Strain Fitness in Agrobacterium fabrum C58 around Atu4797

Experiment: Benthi_leaf_C58C1OD2.0

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benthi_leaf_C58C1OD2.0
1,971,497	+		Atu4795	0.68	+0.1
1,971,497	+		Atu4795	0.68	+0.0
1,971,497	+		Atu4795	0.68	+0.0
1,971,505	-		Atu4795	0.69	-0.0
1,971,505	-		Atu4795	0.69	+0.1
1,971,505	-		Atu4795	0.69	-0.6
1,971,563	+		Atu4795	0.77	+0.6
1,971,571	-		Atu4795	0.78	-0.2
1,971,571	-		Atu4795	0.78	-0.3
1,971,571	-		Atu4795	0.78	-0.0
1,971,571	-		Atu4795	0.78	-0.1
1,971,571	-		Atu4795	0.78	+0.6
1,971,783	+				-0.2
1,971,794	+				+0.3
1,971,829	-				-0.2
1,971,872	-				-0.3
1,971,927	-		Atu4796	0.18	+0.3
1,971,939	+		Atu4796	0.19	+0.3
1,971,994	+		Atu4796	0.28	-0.4
1,971,994	-		Atu4796	0.28	-0.5
1,972,016	-		Atu4796	0.31	-0.2
1,972,016	-		Atu4796	0.31	-0.2
1,972,107	+		Atu4796	0.45	-0.6
1,972,129	+		Atu4796	0.49	-0.1
1,972,179	+		Atu4796	0.57	-0.0
1,972,275	+		Atu4796	0.71	+0.0
1,972,290	+		Atu4796	0.74	+0.0
1,972,290	+		Atu4796	0.74	-0.1
1,972,325	+		Atu4796	0.79	+0.4
1,972,333	-		Atu4796	0.80	+0.2
1,972,333	-		Atu4796	0.80	+0.2
1,972,349	+		Atu4796	0.83	+0.0
1,972,357	-		Atu4796	0.84	+0.1
1,972,363	+		Atu4796	0.85	-0.0
1,972,363	+		Atu4796	0.85	+0.5
1,972,371	-		Atu4796	0.86	+0.4
1,972,482	-				-0.2
1,972,564	-		Atu4797	0.12	-0.3
1,972,590	+		Atu4797	0.15	+0.5
1,972,590	+		Atu4797	0.15	+0.3
1,972,725	-		Atu4797	0.32	-0.4
1,972,922	-		Atu4797	0.56	+0.2
1,972,942	+		Atu4797	0.59	-1.0
1,972,950	-		Atu4797	0.60	+0.6
1,972,950	-		Atu4797	0.60	+0.1
1,972,955	+		Atu4797	0.60	-2.1
1,972,963	-		Atu4797	0.61	-0.2
1,972,999	-		Atu4797	0.66	-0.7
1,973,022	-		Atu4797	0.69	+1.2
1,973,142	+		Atu4797	0.83	+1.4
1,973,143	-		Atu4797	0.84	-1.0
1,973,143	-		Atu4797	0.84	+0.2
1,973,178	+		Atu4797	0.88	+0.5
1,973,191	-		Atu4797	0.89	-0.3
1,973,191	-		Atu4797	0.89	-0.0
1,973,267	-				-0.4
1,973,270	+				-0.3
1,973,306	-				-0.2
1,973,623	-		Atu4798	0.27	-0.6
1,973,646	+		Atu4798	0.29	-0.3
1,973,654	-		Atu4798	0.29	-0.2
1,973,675	-		Atu4798	0.31	-0.0
1,973,744	-		Atu4798	0.36	-1.3
1,973,767	+		Atu4798	0.38	-1.5
1,973,784	+		Atu4798	0.40	-0.6
1,973,882	-		Atu4798	0.47	+0.2
1,974,036	-		Atu4798	0.59	-0.4
1,974,070	-		Atu4798	0.62	+0.2
1,974,144	+		Atu4798	0.67	-0.3
1,974,147	-		Atu4798	0.68	+0.2
1,974,157	+		Atu4798	0.68	+0.2
1,974,186	+		Atu4798	0.71	+0.1