Strain Fitness in Agrobacterium fabrum C58 around Atu4634

Experiment: Benthi_leaf_C58C1OD2.0

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benthi_leaf_C58C1OD2.0
1,783,350	-		Atu4632	0.81	-0.3
1,783,366	-		Atu4632	0.82	-0.1
1,783,390	+		Atu4632	0.83	-0.0
1,783,394	-		Atu4632	0.83	+0.1
1,783,590	+				-0.3
1,783,650	-				+0.3
1,783,678	+				+0.2
1,783,763	+				+0.6
1,783,809	-		Atu4633	0.11	+0.3
1,783,921	+		Atu4633	0.30	-0.0
1,783,929	-		Atu4633	0.32	+0.3
1,783,939	-		Atu4633	0.33	+0.7
1,784,034	+		Atu4633	0.49	+0.2
1,784,061	+		Atu4633	0.54	+0.4
1,784,135	+		Atu4633	0.67	+0.0
1,784,169	+		Atu4633	0.72	-0.1
1,784,287	-				+0.1
1,784,302	-				-0.3
1,784,312	+				-0.1
1,784,374	+				+0.2
1,784,432	+		Atu4634	0.16	-0.7
1,784,517	-		Atu4634	0.29	+0.9
1,784,519	+		Atu4634	0.29	+0.8
1,784,667	-		Atu4634	0.52	-0.0
1,784,675	+		Atu4634	0.53	+0.3
1,784,684	-		Atu4634	0.55	-0.2
1,784,720	-		Atu4634	0.60	+1.1
1,784,843	+		Atu4634	0.80	+0.2
1,785,139	-				-0.6
1,785,238	+		Atu4635	0.28	-0.1
1,785,427	+		Atu4635	0.63	+0.2
1,785,427	+		Atu4635	0.63	+0.8
1,785,427	+		Atu4635	0.63	+0.7
1,785,435	-		Atu4635	0.64	-0.0
1,785,446	+		Atu4635	0.66	-0.1
1,785,458	-		Atu4635	0.69	+0.3
1,785,519	-		Atu4635	0.80	-0.2
1,785,612	-				-1.2
1,785,646	+				+0.1
1,785,654	+				-0.5
1,785,681	+				-0.1
1,785,706	+				-0.0
1,785,753	-				+0.3
1,785,785	+				-1.0
1,785,795	+				+0.1
1,785,877	-				+0.4
1,785,943	+				+1.1
1,785,944	-				+0.1
1,785,953	+				-0.2
1,785,961	-				-0.5
1,785,961	-				+0.3