Strain Fitness in Agrobacterium fabrum C58 around Atu0132

Experiment: Benthi_leaf_C58C1OD2.0

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benthi_leaf_C58C1OD2.0
134,860	-		Atu0130	0.51	-0.3
135,035	+				-1.5
135,048	-				+0.3
135,063	-				-0.9
135,099	+				+0.0
135,107	-				+1.0
135,107	-				-0.2
135,130	-				-0.2
135,130	-				-0.1
135,183	+		Atu0131	0.16	+0.3
135,238	+		Atu0131	0.23	-0.1
135,266	+		Atu0131	0.26	+0.5
135,363	+		Atu0131	0.38	+0.5
135,521	+		Atu0131	0.58	-1.6
135,656	-		Atu0131	0.75	-0.0
135,764	+		Atu0131	0.88	+1.0
135,764	+		Atu0131	0.88	-0.0
135,772	-		Atu0131	0.89	-0.4
135,772	-		Atu0131	0.89	+0.3
135,815	-				-0.1
135,864	+				+0.3
135,913	-				+0.2
135,920	+				-0.2
135,938	-		Atu0132	0.10	-0.1
136,032	-		Atu0132	0.22	+0.4
136,037	-		Atu0132	0.23	-0.1
136,075	-		Atu0132	0.28	-1.5
136,135	+		Atu0132	0.36	-0.6
136,221	+		Atu0132	0.47	-0.7
136,233	+		Atu0132	0.48	-0.3
136,293	+		Atu0132	0.56	-0.1
136,308	-		Atu0132	0.58	+0.8
136,349	-		Atu0132	0.63	-0.1
136,430	+		Atu0132	0.74	-0.4
136,495	-		Atu0132	0.82	-0.6
136,497	-		Atu0132	0.82	-0.6
136,524	+		Atu0132	0.86	-1.0
136,524	+		Atu0132	0.86	-0.2
136,893	+		Atu0133	0.20	+0.0
136,909	-		Atu0133	0.21	+0.0
137,032	+		Atu0133	0.31	+0.8
137,123	+		Atu0133	0.38	+0.0
137,263	+		Atu0133	0.48	+0.2
137,263	+		Atu0133	0.48	-0.4
137,334	+		Atu0133	0.54	+0.0
137,419	+		Atu0133	0.60	+0.0
137,436	+		Atu0133	0.61	+0.3
137,451	+		Atu0133	0.62	-0.1
137,451	+		Atu0133	0.62	-0.1
137,530	-		Atu0133	0.68	+0.1