Strain Fitness in Agrobacterium fabrum C58 around Atu0081

Experiment: Benthi_leaf_C58C1OD2.0

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benthi_leaf_C58C1OD2.0
82,429	+				+0.0
82,434	+				-0.7
82,439	+				-0.1
82,439	+				+0.5
82,439	+				+0.5
82,581	+		Atu0080	0.23	-0.5
82,612	+		Atu0080	0.26	+0.2
82,677	+		Atu0080	0.33	-0.2
82,794	-		Atu0080	0.46	+0.2
83,007	-		Atu0080	0.68	+0.1
83,054	-		Atu0080	0.73	+0.0
83,135	-		Atu0080	0.82	-0.3
83,165	-		Atu0080	0.85	+0.4
83,357	+				+0.1
83,461	+		Atu0081	0.15	+1.6
83,477	+		Atu0081	0.16	-0.8
83,478	+		Atu0081	0.16	-0.0
83,486	-		Atu0081	0.17	-0.4
83,486	-		Atu0081	0.17	-1.9
83,652	-		Atu0081	0.33	-0.0
83,715	+		Atu0081	0.40	-0.8
83,723	-		Atu0081	0.40	+0.3
83,780	+		Atu0081	0.46	+0.4
83,825	+		Atu0081	0.50	-0.5
83,864	-		Atu0081	0.54	+0.0
83,968	+		Atu0081	0.64	-0.1
83,976	-		Atu0081	0.65	-0.1
84,081	-		Atu0081	0.76	+0.0
84,090	+		Atu0081	0.76	+0.2
84,126	+		Atu0081	0.80	-0.3
84,133	-		Atu0081	0.81	+0.4
84,139	+		Atu0081	0.81	+0.4
84,147	-		Atu0081	0.82	+0.3
84,158	-		Atu0081	0.83	+0.1
84,462	+				+1.0