Strain Fitness in Agrobacterium fabrum C58 around Atu5099

Experiment: Benthi_leaf_C58C1OD2.0

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benthi_leaf_C58C1OD2.0
102,301	+				-0.0
102,359	-				-0.7
102,364	+				-0.3
102,372	-				-0.6
102,372	-				+1.9
102,372	-				-0.5
102,468	+				-0.5
102,473	+				-1.0
102,521	-				-0.5
102,555	+		Atu5098	0.12	-0.9
102,601	+		Atu5098	0.18	+0.6
102,704	-		Atu5098	0.32	+0.3
102,726	+		Atu5098	0.35	-0.6
102,739	-		Atu5098	0.37	-0.1
102,767	+		Atu5098	0.40	-1.3
102,767	+		Atu5098	0.40	-1.7
102,801	+		Atu5098	0.45	-0.4
102,801	+		Atu5098	0.45	-0.3
102,803	+		Atu5098	0.45	-0.4
102,812	+		Atu5098	0.46	-0.2
102,820	-		Atu5098	0.47	-0.6
102,889	+		Atu5098	0.56	+0.5
102,957	+		Atu5098	0.65	-0.7
102,975	-		Atu5098	0.68	-0.8
102,975	-		Atu5098	0.68	+0.0
103,060	+		Atu5098	0.79	+0.3
103,060	+		Atu5098	0.79	+0.1
103,067	+		Atu5098	0.80	-1.8
103,090	-		Atu5098	0.83	-0.5
103,147	-				-0.4
103,209	-				-0.2
103,296	-				+0.2
103,309	-				-0.5
103,342	+				-0.3
103,342	+				-0.7
103,350	-				-0.6
103,379	+		Atu5099	0.11	-0.7
103,387	-		Atu5099	0.11	-0.1
103,415	+		Atu5099	0.13	+1.1
103,517	-		Atu5099	0.20	+0.2
103,584	+		Atu5099	0.25	-0.7
103,592	-		Atu5099	0.26	+1.2
103,592	-		Atu5099	0.26	+0.6
103,617	-		Atu5099	0.27	-0.4
103,643	+		Atu5099	0.29	-0.7
103,643	+		Atu5099	0.29	+0.1
103,742	+		Atu5099	0.36	-1.3
103,762	+		Atu5099	0.37	-0.2
103,770	-		Atu5099	0.38	+0.0
103,849	+		Atu5099	0.44	-0.8
103,857	-		Atu5099	0.44	-0.4
103,857	-		Atu5099	0.44	-0.7
103,876	+		Atu5099	0.46	-0.2
103,974	-		Atu5099	0.52	+0.2
103,976	+		Atu5099	0.53	-1.5
103,981	+		Atu5099	0.53	-0.2
103,981	+		Atu5099	0.53	-0.5
104,011	+		Atu5099	0.55	+0.3
104,125	+		Atu5099	0.63	+0.4
104,163	-		Atu5099	0.66	-0.4
104,176	+		Atu5099	0.67	-0.2
104,181	+		Atu5099	0.67	+0.7
104,184	-		Atu5099	0.67	+1.3
104,186	+		Atu5099	0.67	+1.3
104,189	-		Atu5099	0.68	-0.4
104,191	+		Atu5099	0.68	-0.1
104,196	+		Atu5099	0.68	-0.5
104,258	-		Atu5099	0.72	-0.2
104,303	+		Atu5099	0.76	+1.4
104,332	-		Atu5099	0.78	-0.3
104,352	-		Atu5099	0.79	-0.5
104,377	+		Atu5099	0.81	-0.8
104,382	+		Atu5099	0.81	-0.7
104,416	+		Atu5099	0.84	-1.7
104,424	-		Atu5099	0.84	-0.2
104,458	-		Atu5099	0.87	-1.2
104,677	+				-1.5
104,722	-				-0.7
104,731	+				-0.4
104,784	-				-1.2
104,795	+				-1.0
104,795	+				-0.9
104,795	+				-0.4
104,803	-				-0.6
104,836	-				-0.6
104,962	+				-0.6
105,031	+		Atu5100	0.12	-1.1
105,163	+		Atu5100	0.16	-0.1
105,226	-		Atu5100	0.18	-0.3
105,227	+		Atu5100	0.18	-0.3
105,296	-		Atu5100	0.20	-0.9
105,521	+		Atu5100	0.27	-0.3
105,521	+		Atu5100	0.27	-0.9
105,521	+		Atu5100	0.27	-0.6
105,523	+		Atu5100	0.27	-1.1
105,529	-		Atu5100	0.27	-0.7
105,529	-		Atu5100	0.27	+0.1
105,543	+		Atu5100	0.28	+0.2
105,592	+		Atu5100	0.29	-0.7
105,600	-		Atu5100	0.29	-0.4
105,617	+		Atu5100	0.30	+0.4
105,637	+		Atu5100	0.30	+0.0
105,645	-		Atu5100	0.31	-0.6