Strain Fitness in Pseudomonas simiae WCS417 around PS417_04900

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,090,809	+				+1.4
1,090,810	-				-1.9
1,090,843	+		PS417_04895	0.11	+1.7
1,090,945	-		PS417_04895	0.27	-0.9
1,091,005	+		PS417_04895	0.36	-0.2
1,091,006	-		PS417_04895	0.36	-2.2
1,091,006	-		PS417_04895	0.36	-2.9
1,091,119	-		PS417_04895	0.53	-0.4
1,091,242	+		PS417_04895	0.72	-0.8
1,091,376	+				-2.8
1,091,376	+				-2.7
1,091,459	-				+1.8
1,091,496	-				-0.7
1,091,577	+				+0.2
1,091,577	+				-0.2
1,091,583	+				+0.4
1,091,584	-				+0.4
1,091,620	-				+0.2
1,091,718	+				+1.1
1,091,718	+				-2.2
1,091,718	+				+0.4
1,091,719	-				+0.3
1,091,719	-				-1.4
1,091,781	-				-0.1
1,092,149	-		PS417_04900	0.36	-2.3
1,092,149	-		PS417_04900	0.36	+0.1
1,092,151	+		PS417_04900	0.37	+3.3
1,092,151	+		PS417_04900	0.37	+3.3
1,092,241	-		PS417_04900	0.45	+1.8
1,092,292	+		PS417_04900	0.50	-0.5
1,092,293	-		PS417_04900	0.50	+2.6
1,092,293	-		PS417_04900	0.50	-1.1
1,092,293	-		PS417_04900	0.50	+0.3
1,092,421	+		PS417_04900	0.63	+0.8
1,092,422	-		PS417_04900	0.63	+0.5
1,092,518	-		PS417_04900	0.72	+1.9
1,092,666	-		PS417_04900	0.87	+0.3
1,092,666	-		PS417_04900	0.87	-1.9
1,092,691	+		PS417_04900	0.89	+0.4
1,092,692	-		PS417_04900	0.89	+0.2
1,092,692	-		PS417_04900	0.89	+0.4
1,092,784	+				+0.8
1,092,785	-				-0.7
1,093,033	-		PS417_04905	0.13	-2.0
1,093,115	-		PS417_04905	0.20	-0.9
1,093,209	-		PS417_04905	0.28	-1.7
1,093,255	+		PS417_04905	0.32	+0.6
1,093,255	+		PS417_04905	0.32	-1.1
1,093,256	-		PS417_04905	0.32	+0.7
1,093,256	-				+1.5
1,093,687	+		PS417_04905	0.69	-0.4