Strain Fitness in Pseudomonas simiae WCS417 around PS417_04475

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
990,370	+				-1.2
990,408	-				-0.7
990,523	+				-0.2
990,524	-				+0.4
990,538	-				-1.3
990,538	-				+2.2
990,716	+				-0.2
990,804	-				-0.5
990,852	+				+0.4
990,854	+				-0.2
990,855	-				-1.1
990,855	-				+1.6
990,855	-				-0.8
990,871	+				-3.4
990,912	+				+1.7
991,188	-				-0.2
991,188	-				-0.3
991,232	+				+2.0
991,232	+				+1.1
991,233	-				-0.9
991,233	-				-0.8
991,233	-				-3.0
991,233	-				-1.0
991,233	-				-2.6
991,311	+				-0.2
991,589	+		PS417_04475	0.40	+0.3
991,589	+		PS417_04475	0.40	-2.3
991,590	-		PS417_04475	0.40	-4.5
991,702	+		PS417_04475	0.59	-2.4
991,703	-		PS417_04475	0.59	-2.8
991,726	+		PS417_04475	0.63	-3.7
991,726	+		PS417_04475	0.63	+0.6
991,726	+		PS417_04475	0.63	-0.6
991,727	-		PS417_04475	0.63	-0.7
992,096	+		PS417_04480	0.46	-1.9
992,178	-		PS417_04480	0.85	-1.3
992,219	+				-1.9
992,249	+				+0.6
992,278	+				-1.0
992,286	-				+0.2
992,286	-				+0.0
992,291	-				+3.9
992,316	+				-2.1
992,335	-				-1.5
992,377	+				-1.6
992,378	-				-0.2
992,429	-		PS417_04485	0.15	+0.0
992,429	-		PS417_04485	0.15	-0.1
992,431	+		PS417_04485	0.16	-2.1
992,431	+		PS417_04485	0.16	+0.3
992,432	-		PS417_04485	0.16	+0.5
992,432	-		PS417_04485	0.16	-1.3
992,432	-		PS417_04485	0.16	-2.0
992,554	+		PS417_04485	0.63	+0.4
992,555	-		PS417_04485	0.64	-1.9
992,555	-		PS417_04485	0.64	-1.1
992,726	+				+0.4
992,727	-				+0.8
992,800	+				-3.1