Strain Fitness in Pseudomonas simiae WCS417 around PS417_03625

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
823,435	-				-4.5
823,531	+				-1.8
823,531	+				-1.7
823,532	-				+2.2
823,532	-				-0.6
823,541	+				-0.5
823,549	-				+0.5
823,549	-				+1.7
823,560	+				-0.4
823,560	+				-2.1
823,560	+				-0.1
823,560	+				-0.6
823,734	-		PS417_03625	0.28	+1.0
823,795	-		PS417_03625	0.40	+3.3
823,795	-		PS417_03625	0.40	+1.3
823,884	+		PS417_03625	0.57	+1.8
823,884	+		PS417_03625	0.57	+2.0
823,884	+		PS417_03625	0.57	+2.0
823,885	-		PS417_03625	0.57	+1.7
823,885	-		PS417_03625	0.57	+2.9
823,885	-		PS417_03625	0.57	+0.9
823,886	+		PS417_03625	0.58	+1.3
823,886	+		PS417_03625	0.58	+0.6
823,886	+		PS417_03625	0.58	+0.3
824,076	+				+1.2
824,076	+				+0.6
824,077	-				+0.9
824,088	+				+1.6
824,089	-				+0.0
824,089	-				+1.4
824,104	-				-0.2
824,170	+				+1.1
824,185	+				+0.6
824,186	-				-1.5
824,221	-				+0.7
824,340	+		PS417_03630	0.44	-2.5
824,340	+		PS417_03630	0.44	+1.4
824,341	-		PS417_03630	0.45	-0.2
824,341	-		PS417_03630	0.45	-0.0
824,428	-		PS417_03630	0.84	-0.6
824,429	+		PS417_03630	0.84	-3.3
824,560	-				+0.9
824,560	-				-0.0
824,575	+				+1.0
824,576	-				+0.0
824,625	+				+1.4
824,625	+				-0.5
824,911	-		PS417_03635	0.65	-1.9
824,959	-		PS417_03635	0.75	-1.6
825,075	-				-0.3