Strain Fitness in Pseudomonas simiae WCS417 around PS417_28150

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
6,074,368	+		PS417_28145	0.17	+0.9
6,074,369	-		PS417_28145	0.17	+1.7
6,074,451	-		PS417_28145	0.25	+0.9
6,074,560	+		PS417_28145	0.36	+0.9
6,074,560	+		PS417_28145	0.36	-0.6
6,075,096	-				+1.1
6,075,154	-				+0.1
6,075,256	+				+0.3
6,075,256	+				+1.5
6,075,256	+				-2.1
6,075,359	+				+0.1
6,075,359	+				-0.6
6,075,360	-				-0.8
6,075,360	-				-0.1
6,075,614	+		PS417_28150	0.26	-0.6
6,075,614	+		PS417_28150	0.26	-3.1
6,075,617	-		PS417_28150	0.26	-1.0
6,075,617	-		PS417_28150	0.26	-1.7
6,075,617	-		PS417_28150	0.26	+0.2
6,075,617	-		PS417_28150	0.26	-2.3
6,075,646	-		PS417_28150	0.29	-1.8
6,075,677	+		PS417_28150	0.32	-1.0
6,075,680	+		PS417_28150	0.32	+0.1
6,075,680	+		PS417_28150	0.32	-0.4
6,075,680	+		PS417_28150	0.32	+0.6
6,075,932	+		PS417_28150	0.57	-0.8
6,075,933	-		PS417_28150	0.57	+0.9
6,076,313	+				-0.3
6,076,459	+				+4.0
6,076,460	-				-1.9
6,076,474	+				-1.3
6,076,474	+				+1.4
6,076,474	+				+1.0
6,076,474	+				+0.3
6,076,475	-				+0.3
6,076,534	+		PS417_28155	0.14	+2.1
6,076,534	+		PS417_28155	0.14	+0.9
6,076,535	-		PS417_28155	0.14	+0.8
6,076,594	+		PS417_28155	0.20	+0.6
6,076,676	+		PS417_28155	0.27	+0.6
6,076,677	-		PS417_28155	0.27	+0.2
6,076,741	-				+0.9
6,076,756	+		PS417_28155	0.35	+0.7
6,076,757	-		PS417_28155	0.35	-0.7
6,076,757	-		PS417_28155	0.35	-0.7
6,076,762	+		PS417_28155	0.35	+0.3
6,076,763	-		PS417_28155	0.35	+0.7
6,076,870	-		PS417_28155	0.45	+0.0
6,076,956	+		PS417_28155	0.53	+1.3
6,076,976	-		PS417_28155	0.55	-2.8
6,077,014	+		PS417_28155	0.58	+0.9
6,077,015	-		PS417_28155	0.58	-1.1
6,077,023	+		PS417_28155	0.59	+0.5
6,077,024	-		PS417_28155	0.59	+0.7
6,077,041	+		PS417_28155	0.61	+0.3
6,077,042	-		PS417_28155	0.61	-0.8
6,077,042	-		PS417_28155	0.61	-0.4
6,077,042	-		PS417_28155	0.61	+1.9
6,077,147	+		PS417_28155	0.70	+0.7
6,077,148	-		PS417_28155	0.71	-2.5
6,077,148	-		PS417_28155	0.71	+0.5
6,077,148	-		PS417_28155	0.71	-0.7
6,077,148	-		PS417_28155	0.71	-0.6
6,077,152	-		PS417_28155	0.71	+0.2
6,077,152	-		PS417_28155	0.71	-1.7
6,077,152	-		PS417_28155	0.71	+0.9
6,077,233	+		PS417_28155	0.78	-3.1
6,077,248	+		PS417_28155	0.80	-0.1
6,077,249	-		PS417_28155	0.80	+1.2
6,077,249	-				+0.1