Strain Fitness in Pseudomonas simiae WCS417 around PS417_28105

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
6,065,001	+		PS417_28100	0.12	-0.7
6,065,110	+		PS417_28100	0.24	-1.1
6,065,397	+		PS417_28100	0.56	+0.8
6,065,398	-		PS417_28100	0.56	+0.7
6,065,454	+		PS417_28100	0.63	-0.1
6,065,454	+		PS417_28100	0.63	+0.9
6,065,454	+		PS417_28100	0.63	-3.4
6,065,455	-		PS417_28100	0.63	+0.8
6,065,532	+		PS417_28100	0.71	-0.1
6,065,780	-				+0.3
6,065,858	-				-1.8
6,065,884	-				+1.9
6,065,906	-				+1.7
6,065,974	+		PS417_28105	0.22	+2.0
6,065,974	+		PS417_28105	0.22	-1.5
6,065,974	+		PS417_28105	0.22	-3.3
6,065,975	-		PS417_28105	0.22	+1.4
6,065,975	-		PS417_28105	0.22	-1.1
6,065,975	-		PS417_28105	0.22	-0.9
6,065,975	-		PS417_28105	0.22	+1.2
6,065,975	-		PS417_28105	0.22	-2.6
6,065,979	-		PS417_28105	0.23	+0.7
6,066,050	+		PS417_28105	0.36	+1.2
6,066,069	+		PS417_28105	0.40	+2.1
6,066,070	-		PS417_28105	0.40	-0.0
6,066,086	+		PS417_28105	0.43	-0.1
6,066,087	-		PS417_28105	0.43	+0.7
6,066,178	+		PS417_28105	0.60	+1.9
6,066,178	+		PS417_28105	0.60	-1.1
6,066,179	-		PS417_28105	0.60	-3.7
6,066,179	-		PS417_28105	0.60	-1.4
6,066,409	+				+0.0
6,066,410	-				+0.8
6,066,410	-				-1.2
6,066,427	+				-1.1
6,066,471	+				-0.0
6,066,472	-				+1.2
6,066,492	+				+2.1
6,066,492	+				-0.3
6,066,493	-				-0.7
6,066,559	-		PS417_28110	0.36	-2.2
6,066,563	-		PS417_28110	0.38	-1.8
6,066,582	+		PS417_28110	0.46	+0.4
6,066,583	-		PS417_28110	0.46	+0.6
6,066,583	-		PS417_28110	0.46	-1.7
6,066,583	-		PS417_28110	0.46	-0.3
6,066,583	-		PS417_28110	0.46	-1.1
6,066,742	+				+0.6
6,066,743	-				+0.9
6,066,755	-				+1.0
6,066,822	-				-2.9
6,066,822	-				+0.1