Strain Fitness in Pseudomonas simiae WCS417 around PS417_28035

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
6,049,529	-		PS417_28030	0.20	-2.0
6,049,534	+		PS417_28030	0.21	+1.6
6,049,534	+		PS417_28030	0.21	+2.3
6,049,535	-		PS417_28030	0.21	+0.0
6,049,535	-		PS417_28030	0.21	-1.1
6,049,535	-		PS417_28030	0.21	-1.1
6,049,552	+		PS417_28030	0.26	+1.9
6,049,611	-		PS417_28030	0.41	-2.8
6,049,825	+				-0.3
6,049,825	+				+1.7
6,049,825	+				+3.4
6,049,825	+				-0.1
6,049,825	+				+1.4
6,049,826	-				-1.7
6,049,826	-				-1.8
6,049,826	-				+0.3
6,049,877	-				-2.9
6,049,893	-				+0.3
6,049,933	-				+1.4
6,049,945	+				+2.1
6,049,946	-				-0.4
6,050,069	+		PS417_28035	0.12	-0.4
6,050,294	+		PS417_28035	0.44	+0.1
6,050,294	+		PS417_28035	0.44	+1.5
6,050,295	-		PS417_28035	0.44	-0.8
6,050,295	-		PS417_28035	0.44	+0.9
6,050,510	+		PS417_28035	0.76	+0.9
6,050,555	+				+2.9
6,050,555	+		PS417_28035	0.82	+3.2
6,050,555	+		PS417_28035	0.82	+0.2
6,050,556	-		PS417_28035	0.82	-3.3
6,050,720	+				+0.9
6,050,721	-				-2.1
6,050,807	+				+1.5
6,050,810	+				+0.5
6,050,844	-				+1.2
6,051,377	-		PS417_28040	0.49	+1.3